RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
LMO3-224ENST00000540848 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
LMO3-224ENST00000540848 MT1FP04733 61 aa4.36□□□□□ -1.71
LMO3-224ENST00000540848 TNP1P09430 55 aa4.34□□□□□ -1.71
LMO3-224ENST00000540848 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
LMO3-224ENST00000540848 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
LMO3-224ENST00000540848 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
LMO3-224ENST00000540848 MT1BP07438 61 aa4.19□□□□□ -1.74
LMO3-224ENST00000540848 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
LMO3-224ENST00000540848 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
LMO3-224ENST00000540848 MT1XP80297 61 aa4.11□□□□□ -1.75
LMO3-224ENST00000540848 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
LMO3-224ENST00000540848 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
LMO3-224ENST00000540848 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
LMO3-224ENST00000540848 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
LMO3-224ENST00000540848 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
LMO3-224ENST00000540848 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
LMO3-224ENST00000540848 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
LMO3-224ENST00000540848 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
LMO3-224ENST00000540848 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
LMO3-224ENST00000540848 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
LMO3-224ENST00000540848 USH2AO75445 5202 aa3.77□□□□□ -1.81
LMO3-224ENST00000540848 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
LMO3-224ENST00000540848 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
LMO3-224ENST00000540848 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
LMO3-224ENST00000540848 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
LMO3-224ENST00000540848 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
LMO3-224ENST00000540848 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
LMO3-224ENST00000540848 MT1EP04732 61 aa3.6□□□□□ -1.83
LMO3-224ENST00000540848 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
LMO3-224ENST00000540848 MT1LQ93083 61 aa3.57□□□□□ -1.84
LMO3-224ENST00000540848 KMT2DO14686 5537 aa3.53□□□□□ -1.85
LMO3-224ENST00000540848 MT1GP13640 62 aa3.44□□□□□ -1.86
LMO3-224ENST00000540848 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
LMO3-224ENST00000540848 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
LMO3-224ENST00000540848 INE1O15225 51 aa3.38□□□□□ -1.87
LMO3-224ENST00000540848 MT1MQ8N339 61 aa3.38□□□□□ -1.87
LMO3-224ENST00000540848 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
LMO3-224ENST00000540848 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
LMO3-224ENST00000540848 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
LMO3-224ENST00000540848 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
LMO3-224ENST00000540848 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
LMO3-224ENST00000540848 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
LMO3-224ENST00000540848 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
LMO3-224ENST00000540848 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
LMO3-224ENST00000540848 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
LMO3-224ENST00000540848 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
LMO3-224ENST00000540848 SPRR2EP22531 72 aa3.12□□□□□ -1.91
LMO3-224ENST00000540848 SPRR2BP35325 72 aa3.12□□□□□ -1.91
LMO3-224ENST00000540848 SPRR2AP35326 72 aa3.12□□□□□ -1.91
LMO3-224ENST00000540848 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
LMO3-224ENST00000540848 NEBP20929 6669 aa3.08□□□□□ -1.92
LMO3-224ENST00000540848 MT1AP04731 61 aa3.05□□□□□ -1.92
LMO3-224ENST00000540848 SPRR2DP22532 72 aa3.01□□□□□ -1.93
LMO3-224ENST00000540848 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
LMO3-224ENST00000540848 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
LMO3-224ENST00000540848 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
LMO3-224ENST00000540848 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
LMO3-224ENST00000540848 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
LMO3-224ENST00000540848 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
LMO3-224ENST00000540848 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
LMO3-224ENST00000540848 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
LMO3-224ENST00000540848 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
LMO3-224ENST00000540848 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
LMO3-224ENST00000540848 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
LMO3-224ENST00000540848 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
LMO3-224ENST00000540848 MT4P47944 62 aa2.57□□□□□ -2
LMO3-224ENST00000540848 PRM1P04553 51 aa2.48□□□□□ -2.01
LMO3-224ENST00000540848 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
LMO3-224ENST00000540848 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
LMO3-224ENST00000540848 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
LMO3-224ENST00000540848 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
LMO3-224ENST00000540848 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
LMO3-224ENST00000540848 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
LMO3-224ENST00000540848 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
LMO3-224ENST00000540848 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
LMO3-224ENST00000540848 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 224.3 ms