RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
TTC3-225ENST00000540756 MDN1Q9NU22 5596 aa8.54□□□□□ -1.04
TTC3-225ENST00000540756 KRTAP19-3Q7Z4W3 81 aa8.52□□□□□ -1.05
TTC3-225ENST00000540756 MT1GP13640 62 aa8.41□□□□□ -1.06
TTC3-225ENST00000540756 LCE5AQ5TCM9 118 aa8.38□□□□□ -1.07
TTC3-225ENST00000540756 MT1MQ8N339 61 aa8.37□□□□□ -1.07
TTC3-225ENST00000540756 KRTAP4-3Q9BYR4 195 aa8.37□□□□□ -1.07
TTC3-225ENST00000540756 KRTAP19-4Q3LI73 84 aa8.36□□□□□ -1.07
TTC3-225ENST00000540756 KRTAP6-3Q3LI67 103 aa8.36□□□□□ -1.07
TTC3-225ENST00000540756 LCE1AQ5T7P2 110 aa8.34□□□□□ -1.07
TTC3-225ENST00000540756 KRTAP9-6A8MVA2 160 aa8.28□□□□□ -1.08
TTC3-225ENST00000540756 LUZP6Q538Z0 58 aa8.27□□□□□ -1.09
TTC3-225ENST00000540756 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
TTC3-225ENST00000540756 SPRR2EP22531 72 aa8.25□□□□□ -1.09
TTC3-225ENST00000540756 SPRR2BP35325 72 aa8.25□□□□□ -1.09
TTC3-225ENST00000540756 SPRR2AP35326 72 aa8.25□□□□□ -1.09
TTC3-225ENST00000540756 NDUFAF8A1L188 74 aa8.25□□□□□ -1.09
TTC3-225ENST00000540756 KRTAP9-7A8MTY7 169 aa8.12□□□□□ -1.11
TTC3-225ENST00000540756 LOC100996750A0A140TA64 210 aa8.08□□□□□ -1.12
TTC3-225ENST00000540756 NEBP20929 6669 aa8□□□□□ -1.13
TTC3-225ENST00000540756 SPRR2DP22532 72 aa7.93□□□□□ -1.14
TTC3-225ENST00000540756 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
TTC3-225ENST00000540756 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
TTC3-225ENST00000540756 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.2
TTC3-225ENST00000540756 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.2
TTC3-225ENST00000540756 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.2
TTC3-225ENST00000540756 KRTAP6-1Q3LI64 71 aa7.4□□□□□ -1.22
TTC3-225ENST00000540756 MT1AP04731 61 aa7.36□□□□□ -1.23
TTC3-225ENST00000540756 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
TTC3-225ENST00000540756 H3BS24 57 aa7.22□□□□□ -1.25
TTC3-225ENST00000540756 KRTAP20-1Q3LI63 56 aa7.17□□□□□ -1.26
TTC3-225ENST00000540756 KRTAP5-4Q6L8H1 288 aa7.15□□□□□ -1.26
TTC3-225ENST00000540756 KRTAP2-2Q9BYT5 123 aa7.15□□□□□ -1.27
TTC3-225ENST00000540756 A0A0A0MQY5 61 aa7.06□□□□□ -1.28
TTC3-225ENST00000540756 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
TTC3-225ENST00000540756 MT4P47944 62 aa6.97□□□□□ -1.29
TTC3-225ENST00000540756 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
TTC3-225ENST00000540756 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
TTC3-225ENST00000540756 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
TTC3-225ENST00000540756 KRTAP12-4P60329 112 aa6.93□□□□□ -1.3
TTC3-225ENST00000540756 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.31
TTC3-225ENST00000540756 KRTAP6-2Q3LI66 62 aa6.81□□□□□ -1.32
TTC3-225ENST00000540756 LCE1DQ5T752 114 aa6.81□□□□□ -1.32
TTC3-225ENST00000540756 KRTAP20-2Q3LI61 65 aa6.72□□□□□ -1.33
TTC3-225ENST00000540756 MT3P25713 68 aa6.65□□□□□ -1.35
TTC3-225ENST00000540756 INE1O15225 51 aa6.6□□□□□ -1.35
TTC3-225ENST00000540756 OBSCNQ5VST9 7968 aa6.54□□□□□ -1.36
TTC3-225ENST00000540756 KRTAP5-2Q701N4 177 aa6.49□□□□□ -1.37
TTC3-225ENST00000540756 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
TTC3-225ENST00000540756 LCE3DQ9BYE3 92 aa6.46□□□□□ -1.38
TTC3-225ENST00000540756 LCE3EQ5T5B0 92 aa6.26□□□□□ -1.41
TTC3-225ENST00000540756 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
TTC3-225ENST00000540756 KRTAP4-11Q9BYQ6 195 aa5.82□□□□□ -1.48
TTC3-225ENST00000540756 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
TTC3-225ENST00000540756 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
TTC3-225ENST00000540756 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
TTC3-225ENST00000540756 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
TTC3-225ENST00000540756 PRM1P04553 51 aa5.55□□□□□ -1.52
TTC3-225ENST00000540756 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
TTC3-225ENST00000540756 LCE1BQ5T7P3 118 aa5.52□□□□□ -1.53
TTC3-225ENST00000540756 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
TTC3-225ENST00000540756 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
TTC3-225ENST00000540756 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
TTC3-225ENST00000540756 LCE1CQ5T751 118 aa5.37□□□□□ -1.55
TTC3-225ENST00000540756 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
TTC3-225ENST00000540756 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
TTC3-225ENST00000540756 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
TTC3-225ENST00000540756 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
TTC3-225ENST00000540756 KRTAP21-2Q3LI59 83 aa4.83□□□□□ -1.64
TTC3-225ENST00000540756 KRTAP5-11Q6L8G4 156 aa4.72□□□□□ -1.65
TTC3-225ENST00000540756 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
TTC3-225ENST00000540756 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.7
TTC3-225ENST00000540756 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
TTC3-225ENST00000540756 PHGR1C9JFL3 82 aa4.09□□□□□ -1.75
TTC3-225ENST00000540756 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
TTC3-225ENST00000540756 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.87
TTC3-225ENST00000540756 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 88.4 ms