RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
EPB41L3-204ENST00000540638 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
EPB41L3-204ENST00000540638 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
EPB41L3-204ENST00000540638 MT1GP13640 62 aa5.77□□□□□ -1.49
EPB41L3-204ENST00000540638 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
EPB41L3-204ENST00000540638 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
EPB41L3-204ENST00000540638 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
EPB41L3-204ENST00000540638 INE1O15225 51 aa5.67□□□□□ -1.5
EPB41L3-204ENST00000540638 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.5
EPB41L3-204ENST00000540638 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
EPB41L3-204ENST00000540638 MT1MQ8N339 61 aa5.59□□□□□ -1.51
EPB41L3-204ENST00000540638 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
EPB41L3-204ENST00000540638 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
EPB41L3-204ENST00000540638 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
EPB41L3-204ENST00000540638 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
EPB41L3-204ENST00000540638 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
EPB41L3-204ENST00000540638 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
EPB41L3-204ENST00000540638 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
EPB41L3-204ENST00000540638 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
EPB41L3-204ENST00000540638 SPRR2EP22531 72 aa5.31□□□□□ -1.56
EPB41L3-204ENST00000540638 SPRR2BP35325 72 aa5.31□□□□□ -1.56
EPB41L3-204ENST00000540638 SPRR2AP35326 72 aa5.31□□□□□ -1.56
EPB41L3-204ENST00000540638 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
EPB41L3-204ENST00000540638 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
EPB41L3-204ENST00000540638 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
EPB41L3-204ENST00000540638 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
EPB41L3-204ENST00000540638 SPRR2DP22532 72 aa5.06□□□□□ -1.6
EPB41L3-204ENST00000540638 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
EPB41L3-204ENST00000540638 MT1AP04731 61 aa4.92□□□□□ -1.62
EPB41L3-204ENST00000540638 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
EPB41L3-204ENST00000540638 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
EPB41L3-204ENST00000540638 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
EPB41L3-204ENST00000540638 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
EPB41L3-204ENST00000540638 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
EPB41L3-204ENST00000540638 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
EPB41L3-204ENST00000540638 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
EPB41L3-204ENST00000540638 MT4P47944 62 aa4.65□□□□□ -1.66
EPB41L3-204ENST00000540638 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
EPB41L3-204ENST00000540638 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
EPB41L3-204ENST00000540638 PRM1P04553 51 aa4.54□□□□□ -1.68
EPB41L3-204ENST00000540638 MT3P25713 68 aa4.54□□□□□ -1.68
EPB41L3-204ENST00000540638 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
EPB41L3-204ENST00000540638 NEBP20929 6669 aa4.42□□□□□ -1.7
EPB41L3-204ENST00000540638 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
EPB41L3-204ENST00000540638 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
EPB41L3-204ENST00000540638 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
EPB41L3-204ENST00000540638 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
EPB41L3-204ENST00000540638 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
EPB41L3-204ENST00000540638 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
EPB41L3-204ENST00000540638 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
EPB41L3-204ENST00000540638 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
EPB41L3-204ENST00000540638 MUC19Q7Z5P9 8384 aa4□□□□□ -1.77
EPB41L3-204ENST00000540638 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
EPB41L3-204ENST00000540638 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
EPB41L3-204ENST00000540638 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
EPB41L3-204ENST00000540638 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
EPB41L3-204ENST00000540638 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
EPB41L3-204ENST00000540638 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
EPB41L3-204ENST00000540638 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
EPB41L3-204ENST00000540638 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
EPB41L3-204ENST00000540638 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
EPB41L3-204ENST00000540638 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
EPB41L3-204ENST00000540638 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
EPB41L3-204ENST00000540638 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
EPB41L3-204ENST00000540638 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
EPB41L3-204ENST00000540638 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
EPB41L3-204ENST00000540638 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
EPB41L3-204ENST00000540638 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
EPB41L3-204ENST00000540638 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
EPB41L3-204ENST00000540638 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
EPB41L3-204ENST00000540638 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
EPB41L3-204ENST00000540638 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
EPB41L3-204ENST00000540638 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
EPB41L3-204ENST00000540638 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
EPB41L3-204ENST00000540638 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
EPB41L3-204ENST00000540638 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
EPB41L3-204ENST00000540638 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 71.4 ms