RNA–Protein interactions for RNA: ENST00000539539.5

CCAR1-211, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 2

Gene CCAR1, Length 3,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-211ENST00000539539 R4GN34 69 aa1.9□□□□□ -2.11
CCAR1-211ENST00000539539 KRTAP10-10P60014 251 aa1.89□□□□□ -2.11
CCAR1-211ENST00000539539 INE1O15225 51 aa1.86□□□□□ -2.11
CCAR1-211ENST00000539539 MT1BP07438 61 aa1.82□□□□□ -2.12
CCAR1-211ENST00000539539 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
CCAR1-211ENST00000539539 KRTAP10-5P60370 271 aa1.78□□□□□ -2.12
CCAR1-211ENST00000539539 TNP1P09430 55 aa1.78□□□□□ -2.13
CCAR1-211ENST00000539539 MT1XP80297 61 aa1.75□□□□□ -2.13
CCAR1-211ENST00000539539 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
CCAR1-211ENST00000539539 USH2AO75445 5202 aa1.72□□□□□ -2.13
CCAR1-211ENST00000539539 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
CCAR1-211ENST00000539539 KRTAP10-12P60413 245 aa1.72□□□□□ -2.13
CCAR1-211ENST00000539539 SYNE2Q8WXH0 6885 aaKnown RBP1.71□□□□□ -2.14
CCAR1-211ENST00000539539 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
CCAR1-211ENST00000539539 MACF1Q9UPN3 7388 aaKnown RBP1.67□□□□□ -2.14
CCAR1-211ENST00000539539 LCE3AQ5TA76 89 aa1.67□□□□□ -2.14
CCAR1-211ENST00000539539 NEBP20929 6669 aa1.67□□□□□ -2.14
CCAR1-211ENST00000539539 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
CCAR1-211ENST00000539539 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.14
CCAR1-211ENST00000539539 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.14
CCAR1-211ENST00000539539 KRTAP10-7P60409 375 aaPredicted RBP1.63□□□□□ -2.15
CCAR1-211ENST00000539539 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
CCAR1-211ENST00000539539 KMT2DO14686 5537 aa1.6□□□□□ -2.15
CCAR1-211ENST00000539539 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
CCAR1-211ENST00000539539 MT1EP04732 61 aa1.55□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
CCAR1-211ENST00000539539 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
CCAR1-211ENST00000539539 LCE1AQ5T7P2 110 aa1.54□□□□□ -2.16
CCAR1-211ENST00000539539 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP5-8O75690 187 aa1.54□□□□□ -2.16
CCAR1-211ENST00000539539 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
CCAR1-211ENST00000539539 MT1GP13640 62 aa1.52□□□□□ -2.17
CCAR1-211ENST00000539539 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
CCAR1-211ENST00000539539 MT1LQ93083 61 aa1.51□□□□□ -2.17
CCAR1-211ENST00000539539 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
CCAR1-211ENST00000539539 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
CCAR1-211ENST00000539539 LCE3CQ5T5A8 94 aa1.5□□□□□ -2.17
CCAR1-211ENST00000539539 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
CCAR1-211ENST00000539539 SPRR2FQ96RM1 72 aa1.48□□□□□ -2.17
CCAR1-211ENST00000539539 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
CCAR1-211ENST00000539539 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
CCAR1-211ENST00000539539 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
CCAR1-211ENST00000539539 MT1MQ8N339 61 aa1.46□□□□□ -2.18
CCAR1-211ENST00000539539 KRTAP2-2Q9BYT5 123 aa1.45□□□□□ -2.18
CCAR1-211ENST00000539539 SPRR2EP22531 72 aa1.45□□□□□ -2.18
CCAR1-211ENST00000539539 SPRR2BP35325 72 aa1.45□□□□□ -2.18
CCAR1-211ENST00000539539 SPRR2AP35326 72 aa1.45□□□□□ -2.18
CCAR1-211ENST00000539539 DSTQ03001 7570 aaKnown RBP1.44□□□□□ -2.18
CCAR1-211ENST00000539539 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
CCAR1-211ENST00000539539 SPRR2DP22532 72 aa1.41□□□□□ -2.18
CCAR1-211ENST00000539539 LCE1EQ5T753 118 aa1.4□□□□□ -2.19
CCAR1-211ENST00000539539 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
CCAR1-211ENST00000539539 OBSCNQ5VST9 7968 aa1.36□□□□□ -2.19
CCAR1-211ENST00000539539 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
CCAR1-211ENST00000539539 MT1AP04731 61 aa1.33□□□□□ -2.2
CCAR1-211ENST00000539539 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
CCAR1-211ENST00000539539 KRTAP4-3Q9BYR4 195 aa1.31□□□□□ -2.2
CCAR1-211ENST00000539539 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
CCAR1-211ENST00000539539 MT3P25713 68 aa1.26□□□□□ -2.21
CCAR1-211ENST00000539539 PRM1P04553 51 aa1.25□□□□□ -2.21
CCAR1-211ENST00000539539 MT4P47944 62 aa1.25□□□□□ -2.21
CCAR1-211ENST00000539539 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
CCAR1-211ENST00000539539 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
CCAR1-211ENST00000539539 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
CCAR1-211ENST00000539539 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
CCAR1-211ENST00000539539 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
CCAR1-211ENST00000539539 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
CCAR1-211ENST00000539539 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
CCAR1-211ENST00000539539 LCE1CQ5T751 118 aa1□□□□□ -2.25
CCAR1-211ENST00000539539 LCE1BQ5T7P3 118 aa1□□□□□ -2.25
CCAR1-211ENST00000539539 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
CCAR1-211ENST00000539539 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
CCAR1-211ENST00000539539 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
CCAR1-211ENST00000539539 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms