RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 KRTAP9-7A8MTY7 169 aa2.52□□□□□ -2.01
PROM1-219ENST00000539194 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
PROM1-219ENST00000539194 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.01
PROM1-219ENST00000539194 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.01
PROM1-219ENST00000539194 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.01
PROM1-219ENST00000539194 INE1O15225 51 aa2.46□□□□□ -2.02
PROM1-219ENST00000539194 FSIP2Q5CZC0 6907 aa2.46□□□□□ -2.02
PROM1-219ENST00000539194 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
PROM1-219ENST00000539194 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
PROM1-219ENST00000539194 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
PROM1-219ENST00000539194 MT1EP04732 61 aa2.42□□□□□ -2.02
PROM1-219ENST00000539194 MT1LQ93083 61 aa2.42□□□□□ -2.02
PROM1-219ENST00000539194 KRTAP4-7Q9BYR0 210 aa2.41□□□□□ -2.02
PROM1-219ENST00000539194 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.02
PROM1-219ENST00000539194 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
PROM1-219ENST00000539194 KRTAP4-9Q9BYQ8 210 aa2.32□□□□□ -2.04
PROM1-219ENST00000539194 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
PROM1-219ENST00000539194 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
PROM1-219ENST00000539194 LCE5AQ5TCM9 118 aa2.27□□□□□ -2.05
PROM1-219ENST00000539194 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
PROM1-219ENST00000539194 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
PROM1-219ENST00000539194 MT1MQ8N339 61 aa2.25□□□□□ -2.05
PROM1-219ENST00000539194 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
PROM1-219ENST00000539194 MT1GP13640 62 aa2.21□□□□□ -2.05
PROM1-219ENST00000539194 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.05
PROM1-219ENST00000539194 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
PROM1-219ENST00000539194 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
PROM1-219ENST00000539194 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
PROM1-219ENST00000539194 SPRR2EP22531 72 aa2.11□□□□□ -2.07
PROM1-219ENST00000539194 SPRR2BP35325 72 aa2.11□□□□□ -2.07
PROM1-219ENST00000539194 SPRR2AP35326 72 aa2.11□□□□□ -2.07
PROM1-219ENST00000539194 SYNE2Q8WXH0 6885 aaKnown RBP2.11□□□□□ -2.07
PROM1-219ENST00000539194 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
PROM1-219ENST00000539194 MT1AP04731 61 aa2.08□□□□□ -2.08
PROM1-219ENST00000539194 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
PROM1-219ENST00000539194 NEBP20929 6669 aa2.06□□□□□ -2.08
PROM1-219ENST00000539194 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
PROM1-219ENST00000539194 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
PROM1-219ENST00000539194 SPRR2DP22532 72 aa2.03□□□□□ -2.08
PROM1-219ENST00000539194 LCE1AQ5T7P2 110 aa2.03□□□□□ -2.08
PROM1-219ENST00000539194 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
PROM1-219ENST00000539194 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
PROM1-219ENST00000539194 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
PROM1-219ENST00000539194 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
PROM1-219ENST00000539194 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
PROM1-219ENST00000539194 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
PROM1-219ENST00000539194 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
PROM1-219ENST00000539194 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
PROM1-219ENST00000539194 KRTAP2-2Q9BYT5 123 aa1.84□□□□□ -2.11
PROM1-219ENST00000539194 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
PROM1-219ENST00000539194 MT4P47944 62 aa1.8□□□□□ -2.12
PROM1-219ENST00000539194 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
PROM1-219ENST00000539194 PRM1P04553 51 aa1.79□□□□□ -2.12
PROM1-219ENST00000539194 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
PROM1-219ENST00000539194 MT3P25713 68 aa1.75□□□□□ -2.13
PROM1-219ENST00000539194 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
PROM1-219ENST00000539194 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PROM1-219ENST00000539194 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
PROM1-219ENST00000539194 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
PROM1-219ENST00000539194 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
PROM1-219ENST00000539194 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
PROM1-219ENST00000539194 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
PROM1-219ENST00000539194 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
PROM1-219ENST00000539194 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
PROM1-219ENST00000539194 LCE1EQ5T753 118 aa1.53□□□□□ -2.16
PROM1-219ENST00000539194 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
PROM1-219ENST00000539194 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
PROM1-219ENST00000539194 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
PROM1-219ENST00000539194 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
PROM1-219ENST00000539194 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
PROM1-219ENST00000539194 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
PROM1-219ENST00000539194 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
PROM1-219ENST00000539194 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
PROM1-219ENST00000539194 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
PROM1-219ENST00000539194 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
PROM1-219ENST00000539194 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
PROM1-219ENST00000539194 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 64.7 ms