RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 LCE1AQ5T7P2 110 aa8.85□□□□□ -0.99
HMGA2-207ENST00000537275 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
HMGA2-207ENST00000537275 KRTAP12-3P60328 96 aa8.84□□□□□ -0.99
HMGA2-207ENST00000537275 KRTAP19-3Q7Z4W3 81 aa8.7□□□□□ -1.02
HMGA2-207ENST00000537275 MT1LQ93083 61 aa8.66□□□□□ -1.02
HMGA2-207ENST00000537275 LCE5AQ5TCM9 118 aa8.64□□□□□ -1.03
HMGA2-207ENST00000537275 SPRR2DP22532 72 aa8.6□□□□□ -1.03
HMGA2-207ENST00000537275 MT1GP13640 62 aa8.59□□□□□ -1.03
HMGA2-207ENST00000537275 KRTAP15-1Q3LI76 137 aa8.52□□□□□ -1.05
HMGA2-207ENST00000537275 PRAC1Q96KF2 57 aa8.49□□□□□ -1.05
HMGA2-207ENST00000537275 MT1MQ8N339 61 aa8.44□□□□□ -1.06
HMGA2-207ENST00000537275 KTN1-AS1Q86SY8 53 aa8.44□□□□□ -1.06
HMGA2-207ENST00000537275 KRTAP20-1Q3LI63 56 aa8.4□□□□□ -1.06
HMGA2-207ENST00000537275 KRTAP19-4Q3LI73 84 aa8.38□□□□□ -1.07
HMGA2-207ENST00000537275 KRTAP2-3P0C7H8 128 aa8.36□□□□□ -1.07
HMGA2-207ENST00000537275 KRTAP2-4Q9BYR9 128 aa8.36□□□□□ -1.07
HMGA2-207ENST00000537275 LCE3BQ5TA77 95 aa8.3□□□□□ -1.08
HMGA2-207ENST00000537275 KRTAP4-7Q9BYR0 210 aa8.3□□□□□ -1.08
HMGA2-207ENST00000537275 DSTQ03001 7570 aaKnown RBP8.25□□□□□ -1.09
HMGA2-207ENST00000537275 KRTAP4-3Q9BYR4 195 aa8.24□□□□□ -1.09
HMGA2-207ENST00000537275 LCE3CQ5T5A8 94 aa8.22□□□□□ -1.09
HMGA2-207ENST00000537275 KRTAP2-2Q9BYT5 123 aa8.14□□□□□ -1.11
HMGA2-207ENST00000537275 KRTAP2-1Q9BYU5 128 aa8.14□□□□□ -1.11
HMGA2-207ENST00000537275 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
HMGA2-207ENST00000537275 KRTAP9-6A8MVA2 160 aa7.76□□□□□ -1.17
HMGA2-207ENST00000537275 KRTAP5-5Q701N2 237 aaPredicted RBP7.7□□□□□ -1.18
HMGA2-207ENST00000537275 KRTAP5-4Q6L8H1 288 aa7.62□□□□□ -1.19
HMGA2-207ENST00000537275 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
HMGA2-207ENST00000537275 LCE4AQ5TA78 99 aa7.6□□□□□ -1.19
HMGA2-207ENST00000537275 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
HMGA2-207ENST00000537275 H3BS24 57 aa7.53□□□□□ -1.2
HMGA2-207ENST00000537275 MT4P47944 62 aa7.49□□□□□ -1.21
HMGA2-207ENST00000537275 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
HMGA2-207ENST00000537275 MT1AP04731 61 aa7.37□□□□□ -1.23
HMGA2-207ENST00000537275 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
HMGA2-207ENST00000537275 SYNE1Q8NF91 8797 aaKnown RBP7.31□□□□□ -1.24
HMGA2-207ENST00000537275 KRTAP12-4P60329 112 aa7.31□□□□□ -1.24
HMGA2-207ENST00000537275 KRTAP6-1Q3LI64 71 aa7.3□□□□□ -1.24
HMGA2-207ENST00000537275 HMCN1Q96RW7 5635 aa7.29□□□□□ -1.24
HMGA2-207ENST00000537275 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
HMGA2-207ENST00000537275 KRTAP20-2Q3LI61 65 aa7.13□□□□□ -1.27
HMGA2-207ENST00000537275 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
HMGA2-207ENST00000537275 LUZP6Q538Z0 58 aa7.01□□□□□ -1.29
HMGA2-207ENST00000537275 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
HMGA2-207ENST00000537275 KRTAP6-2Q3LI66 62 aa6.82□□□□□ -1.32
HMGA2-207ENST00000537275 KRTAP5-2Q701N4 177 aa6.82□□□□□ -1.32
HMGA2-207ENST00000537275 AHNAK2Q8IVF2 5795 aa6.76□□□□□ -1.33
HMGA2-207ENST00000537275 MT3P25713 68 aa6.71□□□□□ -1.34
HMGA2-207ENST00000537275 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
HMGA2-207ENST00000537275 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
HMGA2-207ENST00000537275 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
HMGA2-207ENST00000537275 OBSCNQ5VST9 7968 aa6.35□□□□□ -1.39
HMGA2-207ENST00000537275 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
HMGA2-207ENST00000537275 KRTAP5-7Q6L8G8 165 aa6.15□□□□□ -1.43
HMGA2-207ENST00000537275 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
HMGA2-207ENST00000537275 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
HMGA2-207ENST00000537275 LCE1EQ5T753 118 aa5.99□□□□□ -1.45
HMGA2-207ENST00000537275 KRTAP5-1Q6L8H4 278 aa5.98□□□□□ -1.45
HMGA2-207ENST00000537275 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.48
HMGA2-207ENST00000537275 MUC5ACP98088 5654 aa5.75□□□□□ -1.49
HMGA2-207ENST00000537275 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
HMGA2-207ENST00000537275 LCE1BQ5T7P3 118 aa5.63□□□□□ -1.51
HMGA2-207ENST00000537275 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
HMGA2-207ENST00000537275 LCE1CQ5T751 118 aa5.57□□□□□ -1.52
HMGA2-207ENST00000537275 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
HMGA2-207ENST00000537275 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.56
HMGA2-207ENST00000537275 INE1O15225 51 aa5.28□□□□□ -1.56
HMGA2-207ENST00000537275 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
HMGA2-207ENST00000537275 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.17□□□□□ -1.58
HMGA2-207ENST00000537275 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
HMGA2-207ENST00000537275 PRM1P04553 51 aa4.82□□□□□ -1.64
HMGA2-207ENST00000537275 KRTAP21-2Q3LI59 83 aa4.81□□□□□ -1.64
HMGA2-207ENST00000537275 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
HMGA2-207ENST00000537275 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
HMGA2-207ENST00000537275 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
HMGA2-207ENST00000537275 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
HMGA2-207ENST00000537275 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
HMGA2-207ENST00000537275 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 310.7 ms