RNA–Protein interactions for RNA: ENST00000536727.5

CADM1-204, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CADM1, Length 3,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-204ENST00000536727 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
CADM1-204ENST00000536727 MT1GP13640 62 aa4.4□□□□□ -1.7
CADM1-204ENST00000536727 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
CADM1-204ENST00000536727 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
CADM1-204ENST00000536727 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
CADM1-204ENST00000536727 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
CADM1-204ENST00000536727 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
CADM1-204ENST00000536727 LCE3BQ5TA77 95 aa4.21□□□□□ -1.73
CADM1-204ENST00000536727 SSPOA2VEC9 5147 aa4.21□□□□□ -1.74
CADM1-204ENST00000536727 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
CADM1-204ENST00000536727 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
CADM1-204ENST00000536727 MT1MQ8N339 61 aa4.14□□□□□ -1.75
CADM1-204ENST00000536727 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
CADM1-204ENST00000536727 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.76
CADM1-204ENST00000536727 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
CADM1-204ENST00000536727 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
CADM1-204ENST00000536727 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
CADM1-204ENST00000536727 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
CADM1-204ENST00000536727 PRM1P04553 51 aa3.95□□□□□ -1.78
CADM1-204ENST00000536727 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
CADM1-204ENST00000536727 KRTAP9-2Q9BYQ4 174 aa3.94□□□□□ -1.78
CADM1-204ENST00000536727 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CADM1-204ENST00000536727 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
CADM1-204ENST00000536727 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
CADM1-204ENST00000536727 MT1AP04731 61 aa3.79□□□□□ -1.8
CADM1-204ENST00000536727 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
CADM1-204ENST00000536727 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
CADM1-204ENST00000536727 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
CADM1-204ENST00000536727 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
CADM1-204ENST00000536727 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
CADM1-204ENST00000536727 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
CADM1-204ENST00000536727 SPRR2EP22531 72 aa3.49□□□□□ -1.85
CADM1-204ENST00000536727 SPRR2BP35325 72 aa3.49□□□□□ -1.85
CADM1-204ENST00000536727 SPRR2AP35326 72 aa3.49□□□□□ -1.85
CADM1-204ENST00000536727 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
CADM1-204ENST00000536727 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
CADM1-204ENST00000536727 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
CADM1-204ENST00000536727 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
CADM1-204ENST00000536727 MT3P25713 68 aa3.39□□□□□ -1.87
CADM1-204ENST00000536727 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
CADM1-204ENST00000536727 SPRR2DP22532 72 aa3.3□□□□□ -1.88
CADM1-204ENST00000536727 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
CADM1-204ENST00000536727 MT4P47944 62 aa3.06□□□□□ -1.92
CADM1-204ENST00000536727 NEBP20929 6669 aa3.06□□□□□ -1.92
CADM1-204ENST00000536727 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
CADM1-204ENST00000536727 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
CADM1-204ENST00000536727 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
CADM1-204ENST00000536727 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
CADM1-204ENST00000536727 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CADM1-204ENST00000536727 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CADM1-204ENST00000536727 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
CADM1-204ENST00000536727 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CADM1-204ENST00000536727 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
CADM1-204ENST00000536727 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
CADM1-204ENST00000536727 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
CADM1-204ENST00000536727 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
CADM1-204ENST00000536727 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
CADM1-204ENST00000536727 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
CADM1-204ENST00000536727 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CADM1-204ENST00000536727 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
CADM1-204ENST00000536727 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
CADM1-204ENST00000536727 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
CADM1-204ENST00000536727 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
CADM1-204ENST00000536727 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
CADM1-204ENST00000536727 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
CADM1-204ENST00000536727 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CADM1-204ENST00000536727 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CADM1-204ENST00000536727 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CADM1-204ENST00000536727 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
CADM1-204ENST00000536727 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
CADM1-204ENST00000536727 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CADM1-204ENST00000536727 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CADM1-204ENST00000536727 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
CADM1-204ENST00000536727 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
CADM1-204ENST00000536727 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
CADM1-204ENST00000536727 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
CADM1-204ENST00000536727 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 113.7 ms