RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 KRTAP19-3Q7Z4W3 81 aa7.76□□□□□ -1.17
HMGA2-206ENST00000536545 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
HMGA2-206ENST00000536545 SPRR2FQ96RM1 72 aa7.73□□□□□ -1.17
HMGA2-206ENST00000536545 MT1GP13640 62 aa7.68□□□□□ -1.18
HMGA2-206ENST00000536545 MT1MQ8N339 61 aa7.66□□□□□ -1.18
HMGA2-206ENST00000536545 LCE5AQ5TCM9 118 aa7.59□□□□□ -1.2
HMGA2-206ENST00000536545 KRTAP5-9P26371 169 aa7.56□□□□□ -1.2
HMGA2-206ENST00000536545 KRTAP4-3Q9BYR4 195 aa7.56□□□□□ -1.2
HMGA2-206ENST00000536545 SYNE2Q8WXH0 6885 aaKnown RBP7.47□□□□□ -1.21
HMGA2-206ENST00000536545 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
HMGA2-206ENST00000536545 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
HMGA2-206ENST00000536545 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
HMGA2-206ENST00000536545 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
HMGA2-206ENST00000536545 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
HMGA2-206ENST00000536545 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
HMGA2-206ENST00000536545 KRTAP2-3P0C7H8 128 aa7.28□□□□□ -1.24
HMGA2-206ENST00000536545 KRTAP2-4Q9BYR9 128 aa7.28□□□□□ -1.24
HMGA2-206ENST00000536545 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
HMGA2-206ENST00000536545 SPRR2EP22531 72 aa7.24□□□□□ -1.25
HMGA2-206ENST00000536545 SPRR2BP35325 72 aa7.24□□□□□ -1.25
HMGA2-206ENST00000536545 SPRR2AP35326 72 aa7.24□□□□□ -1.25
HMGA2-206ENST00000536545 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
HMGA2-206ENST00000536545 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
HMGA2-206ENST00000536545 SPRR2DP22532 72 aa6.97□□□□□ -1.29
HMGA2-206ENST00000536545 INE1O15225 51 aa6.9□□□□□ -1.31
HMGA2-206ENST00000536545 KRTAP5-5Q701N2 237 aaPredicted RBP6.9□□□□□ -1.31
HMGA2-206ENST00000536545 MT1AP04731 61 aa6.82□□□□□ -1.32
HMGA2-206ENST00000536545 KRTAP6-1Q3LI64 71 aa6.79□□□□□ -1.32
HMGA2-206ENST00000536545 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
HMGA2-206ENST00000536545 NEBP20929 6669 aa6.75□□□□□ -1.33
HMGA2-206ENST00000536545 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
HMGA2-206ENST00000536545 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
HMGA2-206ENST00000536545 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
HMGA2-206ENST00000536545 KRTAP5-4Q6L8H1 288 aa6.4□□□□□ -1.38
HMGA2-206ENST00000536545 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
HMGA2-206ENST00000536545 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
HMGA2-206ENST00000536545 KRTAP6-2Q3LI66 62 aa6.18□□□□□ -1.42
HMGA2-206ENST00000536545 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
HMGA2-206ENST00000536545 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
HMGA2-206ENST00000536545 MT3P25713 68 aa6.13□□□□□ -1.43
HMGA2-206ENST00000536545 LCE3DQ9BYE3 92 aa6.13□□□□□ -1.43
HMGA2-206ENST00000536545 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
HMGA2-206ENST00000536545 MT4P47944 62 aa6.05□□□□□ -1.44
HMGA2-206ENST00000536545 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
HMGA2-206ENST00000536545 LCE3EQ5T5B0 92 aa5.99□□□□□ -1.45
HMGA2-206ENST00000536545 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
HMGA2-206ENST00000536545 HMCN1Q96RW7 5635 aa5.91□□□□□ -1.46
HMGA2-206ENST00000536545 LCE1DQ5T752 114 aa5.9□□□□□ -1.47
HMGA2-206ENST00000536545 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
HMGA2-206ENST00000536545 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
HMGA2-206ENST00000536545 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
HMGA2-206ENST00000536545 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
HMGA2-206ENST00000536545 PRM1P04553 51 aa5.42□□□□□ -1.54
HMGA2-206ENST00000536545 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
HMGA2-206ENST00000536545 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
HMGA2-206ENST00000536545 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
HMGA2-206ENST00000536545 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
HMGA2-206ENST00000536545 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
HMGA2-206ENST00000536545 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
HMGA2-206ENST00000536545 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
HMGA2-206ENST00000536545 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
HMGA2-206ENST00000536545 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
HMGA2-206ENST00000536545 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
HMGA2-206ENST00000536545 KRTAP5-8O75690 187 aa4.9□□□□□ -1.63
HMGA2-206ENST00000536545 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
HMGA2-206ENST00000536545 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
HMGA2-206ENST00000536545 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
HMGA2-206ENST00000536545 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
HMGA2-206ENST00000536545 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
HMGA2-206ENST00000536545 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
HMGA2-206ENST00000536545 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
HMGA2-206ENST00000536545 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
HMGA2-206ENST00000536545 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
HMGA2-206ENST00000536545 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
HMGA2-206ENST00000536545 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
HMGA2-206ENST00000536545 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
HMGA2-206ENST00000536545 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms