RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
ABCA4-207ENST00000536513 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
ABCA4-207ENST00000536513 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
ABCA4-207ENST00000536513 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
ABCA4-207ENST00000536513 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
ABCA4-207ENST00000536513 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
ABCA4-207ENST00000536513 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
ABCA4-207ENST00000536513 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
ABCA4-207ENST00000536513 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
ABCA4-207ENST00000536513 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
ABCA4-207ENST00000536513 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
ABCA4-207ENST00000536513 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
ABCA4-207ENST00000536513 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
ABCA4-207ENST00000536513 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.94
ABCA4-207ENST00000536513 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
ABCA4-207ENST00000536513 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
ABCA4-207ENST00000536513 MT1EP04732 61 aa2.86□□□□□ -1.95
ABCA4-207ENST00000536513 MT3P25713 68 aa2.86□□□□□ -1.95
ABCA4-207ENST00000536513 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
ABCA4-207ENST00000536513 MT1GP13640 62 aa2.84□□□□□ -1.95
ABCA4-207ENST00000536513 SPRR2EP22531 72 aa2.83□□□□□ -1.96
ABCA4-207ENST00000536513 SPRR2BP35325 72 aa2.83□□□□□ -1.96
ABCA4-207ENST00000536513 SPRR2AP35326 72 aa2.83□□□□□ -1.96
ABCA4-207ENST00000536513 MT1LQ93083 61 aa2.83□□□□□ -1.96
ABCA4-207ENST00000536513 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
ABCA4-207ENST00000536513 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
ABCA4-207ENST00000536513 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
ABCA4-207ENST00000536513 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.74□□□□□ -1.97
ABCA4-207ENST00000536513 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
ABCA4-207ENST00000536513 MT1MQ8N339 61 aa2.72□□□□□ -1.97
ABCA4-207ENST00000536513 SPRR2DP22532 72 aa2.7□□□□□ -1.98
ABCA4-207ENST00000536513 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
ABCA4-207ENST00000536513 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
ABCA4-207ENST00000536513 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
ABCA4-207ENST00000536513 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
ABCA4-207ENST00000536513 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
ABCA4-207ENST00000536513 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
ABCA4-207ENST00000536513 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
ABCA4-207ENST00000536513 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
ABCA4-207ENST00000536513 MT4P47944 62 aa2.53□□□□□ -2
ABCA4-207ENST00000536513 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
ABCA4-207ENST00000536513 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
ABCA4-207ENST00000536513 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
ABCA4-207ENST00000536513 NEBP20929 6669 aa2.46□□□□□ -2.02
ABCA4-207ENST00000536513 PRM1P04553 51 aa2.43□□□□□ -2.02
ABCA4-207ENST00000536513 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
ABCA4-207ENST00000536513 KRTAP20-1Q3LI63 56 aa2.35□□□□□ -2.03
ABCA4-207ENST00000536513 MT1AP04731 61 aa2.34□□□□□ -2.03
ABCA4-207ENST00000536513 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
ABCA4-207ENST00000536513 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
ABCA4-207ENST00000536513 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
ABCA4-207ENST00000536513 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
ABCA4-207ENST00000536513 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
ABCA4-207ENST00000536513 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
ABCA4-207ENST00000536513 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
ABCA4-207ENST00000536513 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
ABCA4-207ENST00000536513 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
ABCA4-207ENST00000536513 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
ABCA4-207ENST00000536513 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
ABCA4-207ENST00000536513 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
ABCA4-207ENST00000536513 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
ABCA4-207ENST00000536513 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
ABCA4-207ENST00000536513 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
ABCA4-207ENST00000536513 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
ABCA4-207ENST00000536513 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
ABCA4-207ENST00000536513 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
ABCA4-207ENST00000536513 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
ABCA4-207ENST00000536513 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
ABCA4-207ENST00000536513 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
ABCA4-207ENST00000536513 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
ABCA4-207ENST00000536513 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
ABCA4-207ENST00000536513 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
ABCA4-207ENST00000536513 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
ABCA4-207ENST00000536513 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
ABCA4-207ENST00000536513 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
ABCA4-207ENST00000536513 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
ABCA4-207ENST00000536513 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms