RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
CHRNB1-202ENST00000536404 MT1XP80297 61 aa4.56□□□□□ -1.68
CHRNB1-202ENST00000536404 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
CHRNB1-202ENST00000536404 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
CHRNB1-202ENST00000536404 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
CHRNB1-202ENST00000536404 SPRR2EP22531 72 aa4.5□□□□□ -1.69
CHRNB1-202ENST00000536404 SPRR2BP35325 72 aa4.5□□□□□ -1.69
CHRNB1-202ENST00000536404 SPRR2AP35326 72 aa4.5□□□□□ -1.69
CHRNB1-202ENST00000536404 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
CHRNB1-202ENST00000536404 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
CHRNB1-202ENST00000536404 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
CHRNB1-202ENST00000536404 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
CHRNB1-202ENST00000536404 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
CHRNB1-202ENST00000536404 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
CHRNB1-202ENST00000536404 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
CHRNB1-202ENST00000536404 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
CHRNB1-202ENST00000536404 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
CHRNB1-202ENST00000536404 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
CHRNB1-202ENST00000536404 SPRR2DP22532 72 aa4.35□□□□□ -1.71
CHRNB1-202ENST00000536404 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
CHRNB1-202ENST00000536404 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
CHRNB1-202ENST00000536404 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
CHRNB1-202ENST00000536404 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
CHRNB1-202ENST00000536404 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
CHRNB1-202ENST00000536404 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
CHRNB1-202ENST00000536404 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
CHRNB1-202ENST00000536404 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
CHRNB1-202ENST00000536404 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
CHRNB1-202ENST00000536404 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
CHRNB1-202ENST00000536404 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
CHRNB1-202ENST00000536404 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
CHRNB1-202ENST00000536404 MT1EP04732 61 aa4.04□□□□□ -1.76
CHRNB1-202ENST00000536404 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
CHRNB1-202ENST00000536404 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
CHRNB1-202ENST00000536404 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
CHRNB1-202ENST00000536404 MT1GP13640 62 aa3.91□□□□□ -1.78
CHRNB1-202ENST00000536404 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
CHRNB1-202ENST00000536404 MT1LQ93083 61 aa3.88□□□□□ -1.79
CHRNB1-202ENST00000536404 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
CHRNB1-202ENST00000536404 MT1MQ8N339 61 aa3.86□□□□□ -1.79
CHRNB1-202ENST00000536404 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
CHRNB1-202ENST00000536404 MT4P47944 62 aa3.82□□□□□ -1.8
CHRNB1-202ENST00000536404 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
CHRNB1-202ENST00000536404 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
CHRNB1-202ENST00000536404 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
CHRNB1-202ENST00000536404 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
CHRNB1-202ENST00000536404 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
CHRNB1-202ENST00000536404 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
CHRNB1-202ENST00000536404 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CHRNB1-202ENST00000536404 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
CHRNB1-202ENST00000536404 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
CHRNB1-202ENST00000536404 MT1AP04731 61 aa3.45□□□□□ -1.86
CHRNB1-202ENST00000536404 PRM1P04553 51 aa3.3□□□□□ -1.88
CHRNB1-202ENST00000536404 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
CHRNB1-202ENST00000536404 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
CHRNB1-202ENST00000536404 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
CHRNB1-202ENST00000536404 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
CHRNB1-202ENST00000536404 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
CHRNB1-202ENST00000536404 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
CHRNB1-202ENST00000536404 KRTAP5-8O75690 187 aa3.15□□□□□ -1.9
CHRNB1-202ENST00000536404 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
CHRNB1-202ENST00000536404 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
CHRNB1-202ENST00000536404 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
CHRNB1-202ENST00000536404 MT3P25713 68 aa3□□□□□ -1.93
CHRNB1-202ENST00000536404 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CHRNB1-202ENST00000536404 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CHRNB1-202ENST00000536404 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CHRNB1-202ENST00000536404 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
CHRNB1-202ENST00000536404 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CHRNB1-202ENST00000536404 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
CHRNB1-202ENST00000536404 LCE1CQ5T751 118 aa2.57□□□□□ -2
CHRNB1-202ENST00000536404 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
CHRNB1-202ENST00000536404 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CHRNB1-202ENST00000536404 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CHRNB1-202ENST00000536404 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CHRNB1-202ENST00000536404 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
CHRNB1-202ENST00000536404 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 186.5 ms