RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 KRTAP19-3Q7Z4W3 81 aa8.11□□□□□ -1.11
RBFOX1-206ENST00000535565 KRTAP19-4Q3LI73 84 aa8.08□□□□□ -1.12
RBFOX1-206ENST00000535565 MT1GP13640 62 aa8.03□□□□□ -1.12
RBFOX1-206ENST00000535565 SPRR2EP22531 72 aa8.03□□□□□ -1.12
RBFOX1-206ENST00000535565 SPRR2BP35325 72 aa8.03□□□□□ -1.12
RBFOX1-206ENST00000535565 SPRR2AP35326 72 aa8.03□□□□□ -1.12
RBFOX1-206ENST00000535565 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
RBFOX1-206ENST00000535565 LCE5AQ5TCM9 118 aa7.98□□□□□ -1.13
RBFOX1-206ENST00000535565 LCE3CQ5T5A8 94 aa7.97□□□□□ -1.13
RBFOX1-206ENST00000535565 NEBP20929 6669 aa7.95□□□□□ -1.14
RBFOX1-206ENST00000535565 MDN1Q9NU22 5596 aa7.95□□□□□ -1.14
RBFOX1-206ENST00000535565 MT1MQ8N339 61 aa7.9□□□□□ -1.14
RBFOX1-206ENST00000535565 KRTAP4-7Q9BYR0 210 aa7.84□□□□□ -1.15
RBFOX1-206ENST00000535565 SPRR2DP22532 72 aa7.74□□□□□ -1.17
RBFOX1-206ENST00000535565 SPRR5A0A1B0GTR4 108 aa7.72□□□□□ -1.17
RBFOX1-206ENST00000535565 KRTAP4-3Q9BYR4 195 aa7.69□□□□□ -1.18
RBFOX1-206ENST00000535565 KRTAP20-1Q3LI63 56 aa7.54□□□□□ -1.2
RBFOX1-206ENST00000535565 KRTAP9-6A8MVA2 160 aa7.46□□□□□ -1.21
RBFOX1-206ENST00000535565 LCE3BQ5TA77 95 aa7.45□□□□□ -1.22
RBFOX1-206ENST00000535565 DSTQ03001 7570 aaKnown RBP7.45□□□□□ -1.22
RBFOX1-206ENST00000535565 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
RBFOX1-206ENST00000535565 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
RBFOX1-206ENST00000535565 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
RBFOX1-206ENST00000535565 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
RBFOX1-206ENST00000535565 KRTAP2-2Q9BYT5 123 aa7.23□□□□□ -1.25
RBFOX1-206ENST00000535565 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
RBFOX1-206ENST00000535565 KRTAP5-5Q701N2 237 aaPredicted RBP7.13□□□□□ -1.27
RBFOX1-206ENST00000535565 NDUFAF8A1L188 74 aa7.03□□□□□ -1.28
RBFOX1-206ENST00000535565 MT1AP04731 61 aa6.96□□□□□ -1.29
RBFOX1-206ENST00000535565 KRTAP5-4Q6L8H1 288 aa6.92□□□□□ -1.3
RBFOX1-206ENST00000535565 LCE4AQ5TA78 99 aa6.88□□□□□ -1.31
RBFOX1-206ENST00000535565 KRTAP6-1Q3LI64 71 aa6.87□□□□□ -1.31
RBFOX1-206ENST00000535565 KRTAP12-4P60329 112 aa6.74□□□□□ -1.33
RBFOX1-206ENST00000535565 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
RBFOX1-206ENST00000535565 MT4P47944 62 aa6.7□□□□□ -1.34
RBFOX1-206ENST00000535565 SYNE1Q8NF91 8797 aaKnown RBP6.65□□□□□ -1.34
RBFOX1-206ENST00000535565 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
RBFOX1-206ENST00000535565 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
RBFOX1-206ENST00000535565 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
RBFOX1-206ENST00000535565 KRTAP20-2Q3LI61 65 aa6.49□□□□□ -1.37
RBFOX1-206ENST00000535565 HMCN1Q96RW7 5635 aa6.45□□□□□ -1.38
RBFOX1-206ENST00000535565 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
RBFOX1-206ENST00000535565 MT3P25713 68 aa6.34□□□□□ -1.39
RBFOX1-206ENST00000535565 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
RBFOX1-206ENST00000535565 KRTAP5-2Q701N4 177 aa6.24□□□□□ -1.41
RBFOX1-206ENST00000535565 A0A0A0MQY5 61 aa6.17□□□□□ -1.42
RBFOX1-206ENST00000535565 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
RBFOX1-206ENST00000535565 H3BS24 57 aa6.11□□□□□ -1.43
RBFOX1-206ENST00000535565 AHNAK2Q8IVF2 5795 aa6□□□□□ -1.45
RBFOX1-206ENST00000535565 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.46
RBFOX1-206ENST00000535565 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
RBFOX1-206ENST00000535565 INE1O15225 51 aa5.83□□□□□ -1.48
RBFOX1-206ENST00000535565 LCE3EQ5T5B0 92 aa5.76□□□□□ -1.49
RBFOX1-206ENST00000535565 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
RBFOX1-206ENST00000535565 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
RBFOX1-206ENST00000535565 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
RBFOX1-206ENST00000535565 LCE1EQ5T753 118 aa5.55□□□□□ -1.52
RBFOX1-206ENST00000535565 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
RBFOX1-206ENST00000535565 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
RBFOX1-206ENST00000535565 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
RBFOX1-206ENST00000535565 LCE1CQ5T751 118 aa5.16□□□□□ -1.58
RBFOX1-206ENST00000535565 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
RBFOX1-206ENST00000535565 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
RBFOX1-206ENST00000535565 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
RBFOX1-206ENST00000535565 PRM1P04553 51 aa4.91□□□□□ -1.62
RBFOX1-206ENST00000535565 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
RBFOX1-206ENST00000535565 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
RBFOX1-206ENST00000535565 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
RBFOX1-206ENST00000535565 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
RBFOX1-206ENST00000535565 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
RBFOX1-206ENST00000535565 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
RBFOX1-206ENST00000535565 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
RBFOX1-206ENST00000535565 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
RBFOX1-206ENST00000535565 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
RBFOX1-206ENST00000535565 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
RBFOX1-206ENST00000535565 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
RBFOX1-206ENST00000535565 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 99.9 ms