RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 SPRR2DP22532 72 aa5.03□□□□□ -1.6
GOPC-203ENST00000535237 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
GOPC-203ENST00000535237 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
GOPC-203ENST00000535237 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
GOPC-203ENST00000535237 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
GOPC-203ENST00000535237 MT1LQ93083 61 aa4.87□□□□□ -1.63
GOPC-203ENST00000535237 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
GOPC-203ENST00000535237 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
GOPC-203ENST00000535237 MT1EP04732 61 aa4.79□□□□□ -1.64
GOPC-203ENST00000535237 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
GOPC-203ENST00000535237 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
GOPC-203ENST00000535237 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
GOPC-203ENST00000535237 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
GOPC-203ENST00000535237 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
GOPC-203ENST00000535237 PRM1P04553 51 aa4.62□□□□□ -1.67
GOPC-203ENST00000535237 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
GOPC-203ENST00000535237 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
GOPC-203ENST00000535237 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
GOPC-203ENST00000535237 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
GOPC-203ENST00000535237 MT1MQ8N339 61 aa4.59□□□□□ -1.67
GOPC-203ENST00000535237 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
GOPC-203ENST00000535237 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
GOPC-203ENST00000535237 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
GOPC-203ENST00000535237 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
GOPC-203ENST00000535237 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
GOPC-203ENST00000535237 MT4P47944 62 aa4.5□□□□□ -1.69
GOPC-203ENST00000535237 KMT2DO14686 5537 aa4.47□□□□□ -1.69
GOPC-203ENST00000535237 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.69
GOPC-203ENST00000535237 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
GOPC-203ENST00000535237 USH2AO75445 5202 aa4.41□□□□□ -1.7
GOPC-203ENST00000535237 MT3P25713 68 aa4.36□□□□□ -1.71
GOPC-203ENST00000535237 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
GOPC-203ENST00000535237 MT1AP04731 61 aa4.25□□□□□ -1.73
GOPC-203ENST00000535237 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
GOPC-203ENST00000535237 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
GOPC-203ENST00000535237 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
GOPC-203ENST00000535237 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
GOPC-203ENST00000535237 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
GOPC-203ENST00000535237 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
GOPC-203ENST00000535237 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
GOPC-203ENST00000535237 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
GOPC-203ENST00000535237 NEBP20929 6669 aa4.07□□□□□ -1.76
GOPC-203ENST00000535237 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
GOPC-203ENST00000535237 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
GOPC-203ENST00000535237 LCE4AQ5TA78 99 aa4□□□□□ -1.77
GOPC-203ENST00000535237 KRTAP5-9P26371 169 aa3.9□□□□□ -1.79
GOPC-203ENST00000535237 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
GOPC-203ENST00000535237 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
GOPC-203ENST00000535237 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
GOPC-203ENST00000535237 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
GOPC-203ENST00000535237 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
GOPC-203ENST00000535237 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
GOPC-203ENST00000535237 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
GOPC-203ENST00000535237 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
GOPC-203ENST00000535237 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
GOPC-203ENST00000535237 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
GOPC-203ENST00000535237 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
GOPC-203ENST00000535237 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
GOPC-203ENST00000535237 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
GOPC-203ENST00000535237 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
GOPC-203ENST00000535237 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
GOPC-203ENST00000535237 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
GOPC-203ENST00000535237 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
GOPC-203ENST00000535237 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
GOPC-203ENST00000535237 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
GOPC-203ENST00000535237 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
GOPC-203ENST00000535237 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
GOPC-203ENST00000535237 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
GOPC-203ENST00000535237 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
GOPC-203ENST00000535237 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.02
GOPC-203ENST00000535237 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
GOPC-203ENST00000535237 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
GOPC-203ENST00000535237 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
GOPC-203ENST00000535237 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
GOPC-203ENST00000535237 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
GOPC-203ENST00000535237 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
GOPC-203ENST00000535237 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms