RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 HRES1P13985 223 aa1.38□□□□□ -2.19
CHMP4A-208ENST00000534106 SPINK7P58062 85 aa1.38□□□□□ -2.19
CHMP4A-208ENST00000534106 C7orf65Q6ZTY9 151 aa1.38□□□□□ -2.19
CHMP4A-208ENST00000534106 Q96NJ1 140 aa1.38□□□□□ -2.19
CHMP4A-208ENST00000534106 LINC00472Q9H8W2 130 aa1.38□□□□□ -2.19
CHMP4A-208ENST00000534106 A0A1B0GU69 56 aa1.37□□□□□ -2.19
CHMP4A-208ENST00000534106 SPRR1BP22528 89 aa1.37□□□□□ -2.19
CHMP4A-208ENST00000534106 SPRR2FQ96RM1 72 aa1.37□□□□□ -2.19
CHMP4A-208ENST00000534106 CDC42SE1Q9NRR8 79 aa1.37□□□□□ -2.19
CHMP4A-208ENST00000534106 RBM12B-AS1Q9P1G2 102 aa1.37□□□□□ -2.19
CHMP4A-208ENST00000534106 C8orf87E5RJ46 101 aa1.36□□□□□ -2.19
CHMP4A-208ENST00000534106 MT1BP07438 61 aa1.36□□□□□ -2.19
CHMP4A-208ENST00000534106 ACYP2P14621 99 aa1.36□□□□□ -2.19
CHMP4A-208ENST00000534106 LCA10Q71F78 164 aa1.36□□□□□ -2.19
CHMP4A-208ENST00000534106 LINC01558Q9Y6Z2 57 aa1.36□□□□□ -2.19
CHMP4A-208ENST00000534106 A8MUU9 505 aa1.35□□□□□ -2.19
CHMP4A-208ENST00000534106 SPRR2DP22532 72 aa1.35□□□□□ -2.19
CHMP4A-208ENST00000534106 LINC00313P59037 77 aa1.35□□□□□ -2.19
CHMP4A-208ENST00000534106 Q5W150 140 aa1.35□□□□□ -2.19
CHMP4A-208ENST00000534106 MIR22HGQ0VDD5 57 aa1.34□□□□□ -2.19
CHMP4A-208ENST00000534106 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.2
CHMP4A-208ENST00000534106 ADM2Q7Z4H4 148 aa1.33□□□□□ -2.2
CHMP4A-208ENST00000534106 DMAC1Q96GE9 116 aa1.32□□□□□ -2.2
CHMP4A-208ENST00000534106 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
CHMP4A-208ENST00000534106 UQCR11O14957 56 aa1.31□□□□□ -2.2
CHMP4A-208ENST00000534106 CSAG1Q6PB30 78 aa1.31□□□□□ -2.2
CHMP4A-208ENST00000534106 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
CHMP4A-208ENST00000534106 K7ERS5 55 aa1.29□□□□□ -2.2
CHMP4A-208ENST00000534106 LINC01554Q52M75 96 aa1.29□□□□□ -2.2
CHMP4A-208ENST00000534106 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
CHMP4A-208ENST00000534106 SPATA8Q6RVD6 105 aa1.29□□□□□ -2.2
CHMP4A-208ENST00000534106 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
CHMP4A-208ENST00000534106 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
CHMP4A-208ENST00000534106 A0A0D9SG42 100 aa1.27□□□□□ -2.21
CHMP4A-208ENST00000534106 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
CHMP4A-208ENST00000534106 A0A1B0GU33 70 aa1.26□□□□□ -2.21
CHMP4A-208ENST00000534106 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
CHMP4A-208ENST00000534106 SPINT4Q6UDR6 99 aa1.26□□□□□ -2.21
CHMP4A-208ENST00000534106 SPRR2GQ9BYE4 73 aa1.26□□□□□ -2.21
CHMP4A-208ENST00000534106 H0YAA0 97 aa1.25□□□□□ -2.21
CHMP4A-208ENST00000534106 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
CHMP4A-208ENST00000534106 SPRR5A0A1B0GTR4 108 aa1.24□□□□□ -2.21
CHMP4A-208ENST00000534106 S4R3F8 94 aa1.24□□□□□ -2.21
CHMP4A-208ENST00000534106 MT4P47944 62 aa1.23□□□□□ -2.21
CHMP4A-208ENST00000534106 MT1XP80297 61 aa1.23□□□□□ -2.21
CHMP4A-208ENST00000534106 KRTAP25-1Q3LHN0 102 aa1.23□□□□□ -2.21
CHMP4A-208ENST00000534106 ROMO1P60602 79 aa1.22□□□□□ -2.21
CHMP4A-208ENST00000534106 LUZP6Q538Z0 58 aa1.22□□□□□ -2.21
CHMP4A-208ENST00000534106 C10orf95Q9H7T3 257 aa1.2□□□□□ -2.22
CHMP4A-208ENST00000534106 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
CHMP4A-208ENST00000534106 M0QZ58 72 aa1.16□□□□□ -2.22
CHMP4A-208ENST00000534106 P0C880 135 aa1.16□□□□□ -2.22
CHMP4A-208ENST00000534106 KRTAP13-4Q3LI77 160 aa1.16□□□□□ -2.22
CHMP4A-208ENST00000534106 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
CHMP4A-208ENST00000534106 PRO2289Q9P1D8 64 aa1.15□□□□□ -2.23
CHMP4A-208ENST00000534106 KRTAP12-1P59990 96 aa1.13□□□□□ -2.23
CHMP4A-208ENST00000534106 R4GN34 69 aa1.13□□□□□ -2.23
CHMP4A-208ENST00000534106 PLAC4Q8WY50 150 aa1.12□□□□□ -2.23
CHMP4A-208ENST00000534106 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
CHMP4A-208ENST00000534106 MT1EP04732 61 aa1.1□□□□□ -2.23
CHMP4A-208ENST00000534106 KRTAP19-7Q3SYF9 63 aa1.1□□□□□ -2.23
CHMP4A-208ENST00000534106 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
CHMP4A-208ENST00000534106 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
CHMP4A-208ENST00000534106 MT1MQ8N339 61 aa1.06□□□□□ -2.24
CHMP4A-208ENST00000534106 MT1GP13640 62 aa1.05□□□□□ -2.24
CHMP4A-208ENST00000534106 TNP1P09430 55 aa1.04□□□□□ -2.24
CHMP4A-208ENST00000534106 KRTAP19-5Q3LI72 72 aa1.04□□□□□ -2.24
CHMP4A-208ENST00000534106 MT1LQ93083 61 aa1.01□□□□□ -2.25
CHMP4A-208ENST00000534106 KRTAP12-4P60329 112 aa0.98□□□□□ -2.25
CHMP4A-208ENST00000534106 KRTAP12-3P60328 96 aa0.93□□□□□ -2.26
CHMP4A-208ENST00000534106 INE1O15225 51 aa0.9□□□□□ -2.27
CHMP4A-208ENST00000534106 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
CHMP4A-208ENST00000534106 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
CHMP4A-208ENST00000534106 MT1AP04731 61 aa0.83□□□□□ -2.28
CHMP4A-208ENST00000534106 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
CHMP4A-208ENST00000534106 PRM1P04553 51 aa0.68□□□□□ -2.3
CHMP4A-208ENST00000534106 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CHMP4A-208ENST00000534106 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms