RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
ATP2C1-224ENST00000533801 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
ATP2C1-224ENST00000533801 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
ATP2C1-224ENST00000533801 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
ATP2C1-224ENST00000533801 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
ATP2C1-224ENST00000533801 MT1GP13640 62 aa5.38□□□□□ -1.55
ATP2C1-224ENST00000533801 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
ATP2C1-224ENST00000533801 INE1O15225 51 aa5.37□□□□□ -1.55
ATP2C1-224ENST00000533801 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
ATP2C1-224ENST00000533801 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
ATP2C1-224ENST00000533801 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
ATP2C1-224ENST00000533801 MT1MQ8N339 61 aa5.22□□□□□ -1.57
ATP2C1-224ENST00000533801 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
ATP2C1-224ENST00000533801 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
ATP2C1-224ENST00000533801 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
ATP2C1-224ENST00000533801 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
ATP2C1-224ENST00000533801 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
ATP2C1-224ENST00000533801 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
ATP2C1-224ENST00000533801 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
ATP2C1-224ENST00000533801 SPRR2EP22531 72 aa4.95□□□□□ -1.62
ATP2C1-224ENST00000533801 SPRR2BP35325 72 aa4.95□□□□□ -1.62
ATP2C1-224ENST00000533801 SPRR2AP35326 72 aa4.95□□□□□ -1.62
ATP2C1-224ENST00000533801 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
ATP2C1-224ENST00000533801 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
ATP2C1-224ENST00000533801 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
ATP2C1-224ENST00000533801 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
ATP2C1-224ENST00000533801 SPRR2DP22532 72 aa4.72□□□□□ -1.65
ATP2C1-224ENST00000533801 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
ATP2C1-224ENST00000533801 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
ATP2C1-224ENST00000533801 MT1AP04731 61 aa4.59□□□□□ -1.68
ATP2C1-224ENST00000533801 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
ATP2C1-224ENST00000533801 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
ATP2C1-224ENST00000533801 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
ATP2C1-224ENST00000533801 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-224ENST00000533801 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
ATP2C1-224ENST00000533801 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
ATP2C1-224ENST00000533801 MT4P47944 62 aa4.34□□□□□ -1.71
ATP2C1-224ENST00000533801 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
ATP2C1-224ENST00000533801 NEBP20929 6669 aa4.3□□□□□ -1.72
ATP2C1-224ENST00000533801 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
ATP2C1-224ENST00000533801 MT3P25713 68 aa4.2□□□□□ -1.74
ATP2C1-224ENST00000533801 PRM1P04553 51 aa4.2□□□□□ -1.74
ATP2C1-224ENST00000533801 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
ATP2C1-224ENST00000533801 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
ATP2C1-224ENST00000533801 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
ATP2C1-224ENST00000533801 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
ATP2C1-224ENST00000533801 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
ATP2C1-224ENST00000533801 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
ATP2C1-224ENST00000533801 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
ATP2C1-224ENST00000533801 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
ATP2C1-224ENST00000533801 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
ATP2C1-224ENST00000533801 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
ATP2C1-224ENST00000533801 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
ATP2C1-224ENST00000533801 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
ATP2C1-224ENST00000533801 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.84
ATP2C1-224ENST00000533801 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
ATP2C1-224ENST00000533801 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ATP2C1-224ENST00000533801 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
ATP2C1-224ENST00000533801 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
ATP2C1-224ENST00000533801 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
ATP2C1-224ENST00000533801 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
ATP2C1-224ENST00000533801 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
ATP2C1-224ENST00000533801 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
ATP2C1-224ENST00000533801 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
ATP2C1-224ENST00000533801 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
ATP2C1-224ENST00000533801 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
ATP2C1-224ENST00000533801 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
ATP2C1-224ENST00000533801 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
ATP2C1-224ENST00000533801 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
ATP2C1-224ENST00000533801 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
ATP2C1-224ENST00000533801 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
ATP2C1-224ENST00000533801 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
ATP2C1-224ENST00000533801 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
ATP2C1-224ENST00000533801 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
ATP2C1-224ENST00000533801 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
ATP2C1-224ENST00000533801 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
ATP2C1-224ENST00000533801 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 81.8 ms