RNA–Protein interactions for RNA: ENST00000533173.1

CYHR1-211, Transcript of cysteine and histidine rich 1, humanhuman

TSL 1 (best)

Gene CYHR1, Length 6,158 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYHR1-211ENST00000533173 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
CYHR1-211ENST00000533173 MT4P47944 62 aa4.43□□□□□ -1.7
CYHR1-211ENST00000533173 MT1MQ8N339 61 aa4.43□□□□□ -1.7
CYHR1-211ENST00000533173 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
CYHR1-211ENST00000533173 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
CYHR1-211ENST00000533173 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.71
CYHR1-211ENST00000533173 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
CYHR1-211ENST00000533173 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
CYHR1-211ENST00000533173 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
CYHR1-211ENST00000533173 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
CYHR1-211ENST00000533173 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
CYHR1-211ENST00000533173 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
CYHR1-211ENST00000533173 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.74
CYHR1-211ENST00000533173 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
CYHR1-211ENST00000533173 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
CYHR1-211ENST00000533173 HMCN2Q8NDA2 5059 aa4.13□□□□□ -1.75
CYHR1-211ENST00000533173 MT1AP04731 61 aa4.11□□□□□ -1.75
CYHR1-211ENST00000533173 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
CYHR1-211ENST00000533173 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
CYHR1-211ENST00000533173 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
CYHR1-211ENST00000533173 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
CYHR1-211ENST00000533173 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
CYHR1-211ENST00000533173 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
CYHR1-211ENST00000533173 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
CYHR1-211ENST00000533173 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
CYHR1-211ENST00000533173 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
CYHR1-211ENST00000533173 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
CYHR1-211ENST00000533173 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
CYHR1-211ENST00000533173 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
CYHR1-211ENST00000533173 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
CYHR1-211ENST00000533173 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
CYHR1-211ENST00000533173 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
CYHR1-211ENST00000533173 MUC2Q02817 5179 aa3.81□□□□□ -1.8
CYHR1-211ENST00000533173 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
CYHR1-211ENST00000533173 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
CYHR1-211ENST00000533173 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
CYHR1-211ENST00000533173 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
CYHR1-211ENST00000533173 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CYHR1-211ENST00000533173 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
CYHR1-211ENST00000533173 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
CYHR1-211ENST00000533173 KMT2DO14686 5537 aa3.56□□□□□ -1.84
CYHR1-211ENST00000533173 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
CYHR1-211ENST00000533173 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
CYHR1-211ENST00000533173 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
CYHR1-211ENST00000533173 USH2AO75445 5202 aa3.39□□□□□ -1.87
CYHR1-211ENST00000533173 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
CYHR1-211ENST00000533173 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
CYHR1-211ENST00000533173 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
CYHR1-211ENST00000533173 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
CYHR1-211ENST00000533173 NEBP20929 6669 aa3.17□□□□□ -1.9
CYHR1-211ENST00000533173 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
CYHR1-211ENST00000533173 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
CYHR1-211ENST00000533173 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
CYHR1-211ENST00000533173 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
CYHR1-211ENST00000533173 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
CYHR1-211ENST00000533173 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
CYHR1-211ENST00000533173 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
CYHR1-211ENST00000533173 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
CYHR1-211ENST00000533173 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
CYHR1-211ENST00000533173 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
CYHR1-211ENST00000533173 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
CYHR1-211ENST00000533173 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2.01
CYHR1-211ENST00000533173 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
CYHR1-211ENST00000533173 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
CYHR1-211ENST00000533173 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
CYHR1-211ENST00000533173 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
CYHR1-211ENST00000533173 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
CYHR1-211ENST00000533173 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
CYHR1-211ENST00000533173 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
CYHR1-211ENST00000533173 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.08
CYHR1-211ENST00000533173 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
CYHR1-211ENST00000533173 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
CYHR1-211ENST00000533173 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CYHR1-211ENST00000533173 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CYHR1-211ENST00000533173 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
CYHR1-211ENST00000533173 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
CYHR1-211ENST00000533173 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
CYHR1-211ENST00000533173 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms