RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
CAPN1-221ENST00000531068 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
CAPN1-221ENST00000531068 TNP1P09430 55 aa4.33□□□□□ -1.72
CAPN1-221ENST00000531068 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
CAPN1-221ENST00000531068 SPRR2DP22532 72 aa4.27□□□□□ -1.73
CAPN1-221ENST00000531068 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
CAPN1-221ENST00000531068 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
CAPN1-221ENST00000531068 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
CAPN1-221ENST00000531068 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
CAPN1-221ENST00000531068 MT1EP04732 61 aa4.08□□□□□ -1.76
CAPN1-221ENST00000531068 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CAPN1-221ENST00000531068 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
CAPN1-221ENST00000531068 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
CAPN1-221ENST00000531068 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
CAPN1-221ENST00000531068 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
CAPN1-221ENST00000531068 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
CAPN1-221ENST00000531068 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
CAPN1-221ENST00000531068 MT1GP13640 62 aa3.99□□□□□ -1.77
CAPN1-221ENST00000531068 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
CAPN1-221ENST00000531068 H3BS24 57 aa3.93□□□□□ -1.78
CAPN1-221ENST00000531068 MT1LQ93083 61 aa3.9□□□□□ -1.79
CAPN1-221ENST00000531068 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
CAPN1-221ENST00000531068 MT1MQ8N339 61 aa3.87□□□□□ -1.79
CAPN1-221ENST00000531068 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
CAPN1-221ENST00000531068 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
CAPN1-221ENST00000531068 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
CAPN1-221ENST00000531068 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
CAPN1-221ENST00000531068 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
CAPN1-221ENST00000531068 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
CAPN1-221ENST00000531068 MT4P47944 62 aa3.72□□□□□ -1.81
CAPN1-221ENST00000531068 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
CAPN1-221ENST00000531068 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
CAPN1-221ENST00000531068 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
CAPN1-221ENST00000531068 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
CAPN1-221ENST00000531068 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
CAPN1-221ENST00000531068 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
CAPN1-221ENST00000531068 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
CAPN1-221ENST00000531068 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CAPN1-221ENST00000531068 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
CAPN1-221ENST00000531068 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CAPN1-221ENST00000531068 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
CAPN1-221ENST00000531068 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
CAPN1-221ENST00000531068 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
CAPN1-221ENST00000531068 INE1O15225 51 aa3.45□□□□□ -1.86
CAPN1-221ENST00000531068 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
CAPN1-221ENST00000531068 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
CAPN1-221ENST00000531068 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
CAPN1-221ENST00000531068 MT1AP04731 61 aa3.33□□□□□ -1.88
CAPN1-221ENST00000531068 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
CAPN1-221ENST00000531068 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
CAPN1-221ENST00000531068 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
CAPN1-221ENST00000531068 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
CAPN1-221ENST00000531068 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
CAPN1-221ENST00000531068 MT3P25713 68 aa3.08□□□□□ -1.92
CAPN1-221ENST00000531068 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
CAPN1-221ENST00000531068 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
CAPN1-221ENST00000531068 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CAPN1-221ENST00000531068 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
CAPN1-221ENST00000531068 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
CAPN1-221ENST00000531068 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CAPN1-221ENST00000531068 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
CAPN1-221ENST00000531068 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
CAPN1-221ENST00000531068 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CAPN1-221ENST00000531068 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
CAPN1-221ENST00000531068 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CAPN1-221ENST00000531068 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CAPN1-221ENST00000531068 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
CAPN1-221ENST00000531068 PRM1P04553 51 aa2.46□□□□□ -2.02
CAPN1-221ENST00000531068 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
CAPN1-221ENST00000531068 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
CAPN1-221ENST00000531068 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
CAPN1-221ENST00000531068 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
CAPN1-221ENST00000531068 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
CAPN1-221ENST00000531068 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CAPN1-221ENST00000531068 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
CAPN1-221ENST00000531068 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CAPN1-221ENST00000531068 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CAPN1-221ENST00000531068 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 132.4 ms