RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
RPUSD4-205ENST00000530903 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
RPUSD4-205ENST00000530903 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
RPUSD4-205ENST00000530903 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
RPUSD4-205ENST00000530903 MT1BP07438 61 aa4.34□□□□□ -1.71
RPUSD4-205ENST00000530903 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
RPUSD4-205ENST00000530903 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
RPUSD4-205ENST00000530903 USH2AO75445 5202 aa4.26□□□□□ -1.73
RPUSD4-205ENST00000530903 MT3P25713 68 aa4.21□□□□□ -1.73
RPUSD4-205ENST00000530903 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.74
RPUSD4-205ENST00000530903 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
RPUSD4-205ENST00000530903 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
RPUSD4-205ENST00000530903 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
RPUSD4-205ENST00000530903 MT1XP80297 61 aa4.16□□□□□ -1.74
RPUSD4-205ENST00000530903 KRTAP10-5P60370 271 aa4.15□□□□□ -1.74
RPUSD4-205ENST00000530903 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
RPUSD4-205ENST00000530903 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
RPUSD4-205ENST00000530903 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
RPUSD4-205ENST00000530903 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
RPUSD4-205ENST00000530903 KRTAP5-8O75690 187 aa4□□□□□ -1.77
RPUSD4-205ENST00000530903 TNP1P09430 55 aa3.95□□□□□ -1.78
RPUSD4-205ENST00000530903 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
RPUSD4-205ENST00000530903 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
RPUSD4-205ENST00000530903 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
RPUSD4-205ENST00000530903 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
RPUSD4-205ENST00000530903 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
RPUSD4-205ENST00000530903 INE1O15225 51 aa3.84□□□□□ -1.79
RPUSD4-205ENST00000530903 KMT2DO14686 5537 aa3.81□□□□□ -1.8
RPUSD4-205ENST00000530903 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
RPUSD4-205ENST00000530903 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
RPUSD4-205ENST00000530903 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
RPUSD4-205ENST00000530903 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
RPUSD4-205ENST00000530903 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
RPUSD4-205ENST00000530903 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
RPUSD4-205ENST00000530903 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
RPUSD4-205ENST00000530903 NEBP20929 6669 aa3.67□□□□□ -1.82
RPUSD4-205ENST00000530903 MT1EP04732 61 aa3.66□□□□□ -1.82
RPUSD4-205ENST00000530903 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
RPUSD4-205ENST00000530903 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
RPUSD4-205ENST00000530903 SPRR2EP22531 72 aa3.58□□□□□ -1.84
RPUSD4-205ENST00000530903 SPRR2BP35325 72 aa3.58□□□□□ -1.84
RPUSD4-205ENST00000530903 SPRR2AP35326 72 aa3.58□□□□□ -1.84
RPUSD4-205ENST00000530903 MT1LQ93083 61 aa3.56□□□□□ -1.84
RPUSD4-205ENST00000530903 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
RPUSD4-205ENST00000530903 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
RPUSD4-205ENST00000530903 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
RPUSD4-205ENST00000530903 MT1GP13640 62 aa3.49□□□□□ -1.85
RPUSD4-205ENST00000530903 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
RPUSD4-205ENST00000530903 MT1MQ8N339 61 aa3.46□□□□□ -1.86
RPUSD4-205ENST00000530903 SPRR2DP22532 72 aa3.44□□□□□ -1.86
RPUSD4-205ENST00000530903 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
RPUSD4-205ENST00000530903 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
RPUSD4-205ENST00000530903 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
RPUSD4-205ENST00000530903 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
RPUSD4-205ENST00000530903 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
RPUSD4-205ENST00000530903 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
RPUSD4-205ENST00000530903 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
RPUSD4-205ENST00000530903 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
RPUSD4-205ENST00000530903 MT1AP04731 61 aa3.02□□□□□ -1.93
RPUSD4-205ENST00000530903 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
RPUSD4-205ENST00000530903 MT4P47944 62 aa3.01□□□□□ -1.93
RPUSD4-205ENST00000530903 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
RPUSD4-205ENST00000530903 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
RPUSD4-205ENST00000530903 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
RPUSD4-205ENST00000530903 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
RPUSD4-205ENST00000530903 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
RPUSD4-205ENST00000530903 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
RPUSD4-205ENST00000530903 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
RPUSD4-205ENST00000530903 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
RPUSD4-205ENST00000530903 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
RPUSD4-205ENST00000530903 PRM1P04553 51 aa2.5□□□□□ -2.01
RPUSD4-205ENST00000530903 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
RPUSD4-205ENST00000530903 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
RPUSD4-205ENST00000530903 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
RPUSD4-205ENST00000530903 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
RPUSD4-205ENST00000530903 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
RPUSD4-205ENST00000530903 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
RPUSD4-205ENST00000530903 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 217.4 ms