RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 A0A1B0GU69 56 aa3.66□□□□□ -1.82
CCDC90B-217ENST00000530253 A6NN06 94 aa3.66□□□□□ -1.82
CCDC90B-217ENST00000530253 MT1XP80297 61 aa3.66□□□□□ -1.82
CCDC90B-217ENST00000530253 A0A1B0GU33 70 aa3.65□□□□□ -1.83
CCDC90B-217ENST00000530253 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
CCDC90B-217ENST00000530253 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
CCDC90B-217ENST00000530253 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
CCDC90B-217ENST00000530253 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
CCDC90B-217ENST00000530253 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
CCDC90B-217ENST00000530253 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
CCDC90B-217ENST00000530253 KMT2DO14686 5537 aa3.58□□□□□ -1.84
CCDC90B-217ENST00000530253 PRO2289Q9P1D8 64 aa3.58□□□□□ -1.84
CCDC90B-217ENST00000530253 A0A0D9SG42 100 aa3.57□□□□□ -1.84
CCDC90B-217ENST00000530253 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
CCDC90B-217ENST00000530253 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
CCDC90B-217ENST00000530253 Q1T7F1 81 aa3.56□□□□□ -1.84
CCDC90B-217ENST00000530253 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
CCDC90B-217ENST00000530253 NEBP20929 6669 aa3.55□□□□□ -1.84
CCDC90B-217ENST00000530253 V9GYY9 64 aa3.53□□□□□ -1.84
CCDC90B-217ENST00000530253 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
CCDC90B-217ENST00000530253 UQCR11O14957 56 aa3.5□□□□□ -1.85
CCDC90B-217ENST00000530253 PSPHP1O15172 72 aa3.5□□□□□ -1.85
CCDC90B-217ENST00000530253 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
CCDC90B-217ENST00000530253 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
CCDC90B-217ENST00000530253 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
CCDC90B-217ENST00000530253 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
CCDC90B-217ENST00000530253 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
CCDC90B-217ENST00000530253 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
CCDC90B-217ENST00000530253 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
CCDC90B-217ENST00000530253 A6NED7 52 aa3.38□□□□□ -1.87
CCDC90B-217ENST00000530253 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
CCDC90B-217ENST00000530253 SPRR2EP22531 72 aa3.35□□□□□ -1.87
CCDC90B-217ENST00000530253 SPRR2BP35325 72 aa3.35□□□□□ -1.87
CCDC90B-217ENST00000530253 SPRR2AP35326 72 aa3.35□□□□□ -1.87
CCDC90B-217ENST00000530253 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
CCDC90B-217ENST00000530253 K7ERS5 55 aa3.29□□□□□ -1.88
CCDC90B-217ENST00000530253 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
CCDC90B-217ENST00000530253 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
CCDC90B-217ENST00000530253 TNP1P09430 55 aa3.28□□□□□ -1.88
CCDC90B-217ENST00000530253 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
CCDC90B-217ENST00000530253 MT1EP04732 61 aa3.23□□□□□ -1.89
CCDC90B-217ENST00000530253 SPRR2DP22532 72 aa3.23□□□□□ -1.89
CCDC90B-217ENST00000530253 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
CCDC90B-217ENST00000530253 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
CCDC90B-217ENST00000530253 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
CCDC90B-217ENST00000530253 ROMO1P60602 79 aa3.16□□□□□ -1.9
CCDC90B-217ENST00000530253 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
CCDC90B-217ENST00000530253 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
CCDC90B-217ENST00000530253 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CCDC90B-217ENST00000530253 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
CCDC90B-217ENST00000530253 MT1LQ93083 61 aa3.12□□□□□ -1.91
CCDC90B-217ENST00000530253 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
CCDC90B-217ENST00000530253 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
CCDC90B-217ENST00000530253 MT1GP13640 62 aa3.07□□□□□ -1.92
CCDC90B-217ENST00000530253 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CCDC90B-217ENST00000530253 PMAIP1Q13794 54 aa2.93□□□□□ -1.94
CCDC90B-217ENST00000530253 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
CCDC90B-217ENST00000530253 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
CCDC90B-217ENST00000530253 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
CCDC90B-217ENST00000530253 MT4P47944 62 aa2.86□□□□□ -1.95
CCDC90B-217ENST00000530253 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
CCDC90B-217ENST00000530253 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
CCDC90B-217ENST00000530253 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
CCDC90B-217ENST00000530253 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
CCDC90B-217ENST00000530253 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
CCDC90B-217ENST00000530253 MT1AP04731 61 aa2.65□□□□□ -1.99
CCDC90B-217ENST00000530253 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
CCDC90B-217ENST00000530253 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
CCDC90B-217ENST00000530253 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CCDC90B-217ENST00000530253 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
CCDC90B-217ENST00000530253 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
CCDC90B-217ENST00000530253 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
CCDC90B-217ENST00000530253 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
CCDC90B-217ENST00000530253 INE1O15225 51 aa1.68□□□□□ -2.14
CCDC90B-217ENST00000530253 PRM1P04553 51 aa1.64□□□□□ -2.15
CCDC90B-217ENST00000530253 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
CCDC90B-217ENST00000530253 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
CCDC90B-217ENST00000530253 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 157.1 ms