RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
LRP5-206ENST00000529993 SPRR2DP22532 72 aa4.83□□□□□ -1.64
LRP5-206ENST00000529993 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
LRP5-206ENST00000529993 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
LRP5-206ENST00000529993 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
LRP5-206ENST00000529993 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
LRP5-206ENST00000529993 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
LRP5-206ENST00000529993 MT1MQ8N339 61 aa4.75□□□□□ -1.65
LRP5-206ENST00000529993 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
LRP5-206ENST00000529993 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
LRP5-206ENST00000529993 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
LRP5-206ENST00000529993 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
LRP5-206ENST00000529993 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
LRP5-206ENST00000529993 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
LRP5-206ENST00000529993 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
LRP5-206ENST00000529993 USH2AO75445 5202 aa4.49□□□□□ -1.69
LRP5-206ENST00000529993 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
LRP5-206ENST00000529993 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
LRP5-206ENST00000529993 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
LRP5-206ENST00000529993 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
LRP5-206ENST00000529993 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
LRP5-206ENST00000529993 KMT2DO14686 5537 aa4.45□□□□□ -1.7
LRP5-206ENST00000529993 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
LRP5-206ENST00000529993 MT3P25713 68 aa4.39□□□□□ -1.71
LRP5-206ENST00000529993 PRM1P04553 51 aa4.38□□□□□ -1.71
LRP5-206ENST00000529993 MT4P47944 62 aa4.38□□□□□ -1.71
LRP5-206ENST00000529993 MT1AP04731 61 aa4.33□□□□□ -1.72
LRP5-206ENST00000529993 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
LRP5-206ENST00000529993 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
LRP5-206ENST00000529993 LCE1DQ5T752 114 aa4.15□□□□□ -1.74
LRP5-206ENST00000529993 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
LRP5-206ENST00000529993 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
LRP5-206ENST00000529993 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
LRP5-206ENST00000529993 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
LRP5-206ENST00000529993 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
LRP5-206ENST00000529993 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
LRP5-206ENST00000529993 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
LRP5-206ENST00000529993 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
LRP5-206ENST00000529993 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
LRP5-206ENST00000529993 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
LRP5-206ENST00000529993 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
LRP5-206ENST00000529993 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
LRP5-206ENST00000529993 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
LRP5-206ENST00000529993 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
LRP5-206ENST00000529993 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
LRP5-206ENST00000529993 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
LRP5-206ENST00000529993 NEBP20929 6669 aa3.55□□□□□ -1.84
LRP5-206ENST00000529993 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
LRP5-206ENST00000529993 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
LRP5-206ENST00000529993 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
LRP5-206ENST00000529993 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
LRP5-206ENST00000529993 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
LRP5-206ENST00000529993 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
LRP5-206ENST00000529993 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
LRP5-206ENST00000529993 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
LRP5-206ENST00000529993 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
LRP5-206ENST00000529993 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
LRP5-206ENST00000529993 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
LRP5-206ENST00000529993 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
LRP5-206ENST00000529993 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
LRP5-206ENST00000529993 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
LRP5-206ENST00000529993 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
LRP5-206ENST00000529993 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
LRP5-206ENST00000529993 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
LRP5-206ENST00000529993 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
LRP5-206ENST00000529993 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
LRP5-206ENST00000529993 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
LRP5-206ENST00000529993 KRTAP5-8O75690 187 aa2.55□□□□□ -2
LRP5-206ENST00000529993 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
LRP5-206ENST00000529993 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
LRP5-206ENST00000529993 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
LRP5-206ENST00000529993 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
LRP5-206ENST00000529993 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
LRP5-206ENST00000529993 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
LRP5-206ENST00000529993 PHGR1C9JFL3 82 aa2.03□□□□□ -2.09
LRP5-206ENST00000529993 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
LRP5-206ENST00000529993 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
LRP5-206ENST00000529993 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms