RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 MT1LQ93083 61 aa5.14□□□□□ -1.59
USP35-203ENST00000529308 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
USP35-203ENST00000529308 MT1EP04732 61 aa5.11□□□□□ -1.59
USP35-203ENST00000529308 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
USP35-203ENST00000529308 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
USP35-203ENST00000529308 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
USP35-203ENST00000529308 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
USP35-203ENST00000529308 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
USP35-203ENST00000529308 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
USP35-203ENST00000529308 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
USP35-203ENST00000529308 SPRR2DP22532 72 aa4.97□□□□□ -1.61
USP35-203ENST00000529308 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
USP35-203ENST00000529308 MT1MQ8N339 61 aa4.91□□□□□ -1.62
USP35-203ENST00000529308 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
USP35-203ENST00000529308 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
USP35-203ENST00000529308 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
USP35-203ENST00000529308 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
USP35-203ENST00000529308 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
USP35-203ENST00000529308 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
USP35-203ENST00000529308 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
USP35-203ENST00000529308 SSPOA2VEC9 5147 aa4.65□□□□□ -1.67
USP35-203ENST00000529308 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
USP35-203ENST00000529308 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
USP35-203ENST00000529308 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
USP35-203ENST00000529308 MT4P47944 62 aa4.6□□□□□ -1.67
USP35-203ENST00000529308 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.67
USP35-203ENST00000529308 MT3P25713 68 aa4.46□□□□□ -1.69
USP35-203ENST00000529308 PRM1P04553 51 aa4.42□□□□□ -1.7
USP35-203ENST00000529308 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
USP35-203ENST00000529308 MT1AP04731 61 aa4.41□□□□□ -1.7
USP35-203ENST00000529308 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
USP35-203ENST00000529308 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
USP35-203ENST00000529308 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
USP35-203ENST00000529308 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
USP35-203ENST00000529308 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
USP35-203ENST00000529308 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
USP35-203ENST00000529308 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
USP35-203ENST00000529308 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
USP35-203ENST00000529308 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
USP35-203ENST00000529308 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
USP35-203ENST00000529308 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
USP35-203ENST00000529308 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
USP35-203ENST00000529308 NEBP20929 6669 aa3.94□□□□□ -1.78
USP35-203ENST00000529308 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
USP35-203ENST00000529308 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
USP35-203ENST00000529308 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
USP35-203ENST00000529308 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
USP35-203ENST00000529308 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
USP35-203ENST00000529308 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.82
USP35-203ENST00000529308 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
USP35-203ENST00000529308 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
USP35-203ENST00000529308 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
USP35-203ENST00000529308 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
USP35-203ENST00000529308 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
USP35-203ENST00000529308 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
USP35-203ENST00000529308 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
USP35-203ENST00000529308 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
USP35-203ENST00000529308 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
USP35-203ENST00000529308 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
USP35-203ENST00000529308 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
USP35-203ENST00000529308 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
USP35-203ENST00000529308 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
USP35-203ENST00000529308 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
USP35-203ENST00000529308 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
USP35-203ENST00000529308 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
USP35-203ENST00000529308 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
USP35-203ENST00000529308 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
USP35-203ENST00000529308 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
USP35-203ENST00000529308 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
USP35-203ENST00000529308 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
USP35-203ENST00000529308 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
USP35-203ENST00000529308 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
USP35-203ENST00000529308 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
USP35-203ENST00000529308 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
USP35-203ENST00000529308 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
USP35-203ENST00000529308 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
USP35-203ENST00000529308 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 77.9 ms