RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
FDFT1-213ENST00000528729 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
FDFT1-213ENST00000528729 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.98
FDFT1-213ENST00000528729 A0A0D9SG42 100 aa2.58□□□□□ -2
FDFT1-213ENST00000528729 S4R3F8 94 aa2.57□□□□□ -2
FDFT1-213ENST00000528729 KRTAP12-3P60328 96 aa2.56□□□□□ -2
FDFT1-213ENST00000528729 MT2AP02795 61 aa2.54□□□□□ -2
FDFT1-213ENST00000528729 MT1FP04733 61 aa2.51□□□□□ -2.01
FDFT1-213ENST00000528729 USH2AO75445 5202 aa2.5□□□□□ -2.01
FDFT1-213ENST00000528729 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
FDFT1-213ENST00000528729 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
FDFT1-213ENST00000528729 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
FDFT1-213ENST00000528729 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
FDFT1-213ENST00000528729 M0QZ58 72 aa2.37□□□□□ -2.03
FDFT1-213ENST00000528729 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
FDFT1-213ENST00000528729 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
FDFT1-213ENST00000528729 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
FDFT1-213ENST00000528729 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
FDFT1-213ENST00000528729 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
FDFT1-213ENST00000528729 MT1BP07438 61 aa2.29□□□□□ -2.04
FDFT1-213ENST00000528729 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
FDFT1-213ENST00000528729 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
FDFT1-213ENST00000528729 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
FDFT1-213ENST00000528729 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
FDFT1-213ENST00000528729 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
FDFT1-213ENST00000528729 KMT2DO14686 5537 aa2.21□□□□□ -2.06
FDFT1-213ENST00000528729 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
FDFT1-213ENST00000528729 NEBP20929 6669 aa2.17□□□□□ -2.06
FDFT1-213ENST00000528729 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
FDFT1-213ENST00000528729 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
FDFT1-213ENST00000528729 SPRR2EP22531 72 aa2.14□□□□□ -2.07
FDFT1-213ENST00000528729 SPRR2BP35325 72 aa2.14□□□□□ -2.07
FDFT1-213ENST00000528729 SPRR2AP35326 72 aa2.14□□□□□ -2.07
FDFT1-213ENST00000528729 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
FDFT1-213ENST00000528729 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
FDFT1-213ENST00000528729 MT1XP80297 61 aa2.13□□□□□ -2.07
FDFT1-213ENST00000528729 TNP1P09430 55 aa2.1□□□□□ -2.07
FDFT1-213ENST00000528729 SPRR2DP22532 72 aa2.07□□□□□ -2.08
FDFT1-213ENST00000528729 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
FDFT1-213ENST00000528729 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
FDFT1-213ENST00000528729 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
FDFT1-213ENST00000528729 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
FDFT1-213ENST00000528729 KRTAP19-3Q7Z4W3 81 aa1.92□□□□□ -2.1
FDFT1-213ENST00000528729 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
FDFT1-213ENST00000528729 MT1EP04732 61 aa1.9□□□□□ -2.11
FDFT1-213ENST00000528729 MT1GP13640 62 aa1.9□□□□□ -2.11
FDFT1-213ENST00000528729 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
FDFT1-213ENST00000528729 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
FDFT1-213ENST00000528729 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
FDFT1-213ENST00000528729 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
FDFT1-213ENST00000528729 MT1MQ8N339 61 aa1.81□□□□□ -2.12
FDFT1-213ENST00000528729 MT4P47944 62 aa1.8□□□□□ -2.12
FDFT1-213ENST00000528729 MT1LQ93083 61 aa1.8□□□□□ -2.12
FDFT1-213ENST00000528729 KRTAP5-4Q6L8H1 288 aa1.79□□□□□ -2.12
FDFT1-213ENST00000528729 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
FDFT1-213ENST00000528729 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
FDFT1-213ENST00000528729 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
FDFT1-213ENST00000528729 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
FDFT1-213ENST00000528729 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
FDFT1-213ENST00000528729 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
FDFT1-213ENST00000528729 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
FDFT1-213ENST00000528729 PRM1P04553 51 aa1.62□□□□□ -2.15
FDFT1-213ENST00000528729 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
FDFT1-213ENST00000528729 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
FDFT1-213ENST00000528729 MT1AP04731 61 aa1.54□□□□□ -2.16
FDFT1-213ENST00000528729 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
FDFT1-213ENST00000528729 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
FDFT1-213ENST00000528729 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
FDFT1-213ENST00000528729 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
FDFT1-213ENST00000528729 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
FDFT1-213ENST00000528729 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
FDFT1-213ENST00000528729 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
FDFT1-213ENST00000528729 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.19
FDFT1-213ENST00000528729 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
FDFT1-213ENST00000528729 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
FDFT1-213ENST00000528729 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
FDFT1-213ENST00000528729 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
FDFT1-213ENST00000528729 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 62.9 ms