RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 MT1EP04732 61 aa2.76□□□□□ -1.97
SOX6-211ENST00000528429 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
SOX6-211ENST00000528429 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
SOX6-211ENST00000528429 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
SOX6-211ENST00000528429 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
SOX6-211ENST00000528429 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
SOX6-211ENST00000528429 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
SOX6-211ENST00000528429 SPRR2FQ96RM1 72 aa2.73□□□□□ -1.97
SOX6-211ENST00000528429 MT1LQ93083 61 aa2.72□□□□□ -1.97
SOX6-211ENST00000528429 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
SOX6-211ENST00000528429 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
SOX6-211ENST00000528429 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
SOX6-211ENST00000528429 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
SOX6-211ENST00000528429 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
SOX6-211ENST00000528429 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
SOX6-211ENST00000528429 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
SOX6-211ENST00000528429 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
SOX6-211ENST00000528429 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.61□□□□□ -1.99
SOX6-211ENST00000528429 MT1GP13640 62 aa2.61□□□□□ -1.99
SOX6-211ENST00000528429 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
SOX6-211ENST00000528429 KRTAP19-4Q3LI73 84 aa2.6□□□□□ -1.99
SOX6-211ENST00000528429 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
SOX6-211ENST00000528429 MT1MQ8N339 61 aa2.6□□□□□ -1.99
SOX6-211ENST00000528429 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
SOX6-211ENST00000528429 KRTAP5-9P26371 169 aa2.59□□□□□ -2
SOX6-211ENST00000528429 SPRR2EP22531 72 aa2.56□□□□□ -2
SOX6-211ENST00000528429 SPRR2BP35325 72 aa2.56□□□□□ -2
SOX6-211ENST00000528429 SPRR2AP35326 72 aa2.56□□□□□ -2
SOX6-211ENST00000528429 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
SOX6-211ENST00000528429 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
SOX6-211ENST00000528429 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2.01
SOX6-211ENST00000528429 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
SOX6-211ENST00000528429 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
SOX6-211ENST00000528429 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
SOX6-211ENST00000528429 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
SOX6-211ENST00000528429 SPRR2DP22532 72 aa2.46□□□□□ -2.02
SOX6-211ENST00000528429 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
SOX6-211ENST00000528429 LCE3BQ5TA77 95 aa2.39□□□□□ -2.03
SOX6-211ENST00000528429 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SOX6-211ENST00000528429 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
SOX6-211ENST00000528429 NEBP20929 6669 aa2.35□□□□□ -2.03
SOX6-211ENST00000528429 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
SOX6-211ENST00000528429 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
SOX6-211ENST00000528429 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
SOX6-211ENST00000528429 MT1AP04731 61 aa2.29□□□□□ -2.04
SOX6-211ENST00000528429 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
SOX6-211ENST00000528429 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
SOX6-211ENST00000528429 MT3P25713 68 aa2.23□□□□□ -2.05
SOX6-211ENST00000528429 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SOX6-211ENST00000528429 PRM1P04553 51 aa2.19□□□□□ -2.06
SOX6-211ENST00000528429 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
SOX6-211ENST00000528429 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
SOX6-211ENST00000528429 MT4P47944 62 aa2.17□□□□□ -2.06
SOX6-211ENST00000528429 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
SOX6-211ENST00000528429 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
SOX6-211ENST00000528429 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
SOX6-211ENST00000528429 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
SOX6-211ENST00000528429 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
SOX6-211ENST00000528429 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
SOX6-211ENST00000528429 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
SOX6-211ENST00000528429 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
SOX6-211ENST00000528429 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
SOX6-211ENST00000528429 LCE1BQ5T7P3 118 aa1.77□□□□□ -2.13
SOX6-211ENST00000528429 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
SOX6-211ENST00000528429 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
SOX6-211ENST00000528429 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
SOX6-211ENST00000528429 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
SOX6-211ENST00000528429 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
SOX6-211ENST00000528429 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
SOX6-211ENST00000528429 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
SOX6-211ENST00000528429 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
SOX6-211ENST00000528429 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SOX6-211ENST00000528429 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
SOX6-211ENST00000528429 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
SOX6-211ENST00000528429 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
SOX6-211ENST00000528429 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
SOX6-211ENST00000528429 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms