RNA–Protein interactions for RNA: ENST00000526683.5

PUF60-208, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PUF60, Length 2,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-208ENST00000526683 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
PUF60-208ENST00000526683 SPRR2FQ96RM1 72 aa5.52□□□□□ -1.53
PUF60-208ENST00000526683 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
PUF60-208ENST00000526683 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
PUF60-208ENST00000526683 MT1LQ93083 61 aa5.5□□□□□ -1.53
PUF60-208ENST00000526683 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
PUF60-208ENST00000526683 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
PUF60-208ENST00000526683 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
PUF60-208ENST00000526683 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
PUF60-208ENST00000526683 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
PUF60-208ENST00000526683 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
PUF60-208ENST00000526683 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
PUF60-208ENST00000526683 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
PUF60-208ENST00000526683 MT1GP13640 62 aa5.34□□□□□ -1.56
PUF60-208ENST00000526683 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
PUF60-208ENST00000526683 MT1MQ8N339 61 aa5.29□□□□□ -1.56
PUF60-208ENST00000526683 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
PUF60-208ENST00000526683 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
PUF60-208ENST00000526683 SPRR2EP22531 72 aa5.25□□□□□ -1.57
PUF60-208ENST00000526683 SPRR2BP35325 72 aa5.25□□□□□ -1.57
PUF60-208ENST00000526683 SPRR2AP35326 72 aa5.25□□□□□ -1.57
PUF60-208ENST00000526683 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
PUF60-208ENST00000526683 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
PUF60-208ENST00000526683 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
PUF60-208ENST00000526683 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
PUF60-208ENST00000526683 SPRR2DP22532 72 aa5.06□□□□□ -1.6
PUF60-208ENST00000526683 NEBP20929 6669 aa4.95□□□□□ -1.62
PUF60-208ENST00000526683 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
PUF60-208ENST00000526683 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
PUF60-208ENST00000526683 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
PUF60-208ENST00000526683 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
PUF60-208ENST00000526683 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
PUF60-208ENST00000526683 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
PUF60-208ENST00000526683 MT1AP04731 61 aa4.67□□□□□ -1.66
PUF60-208ENST00000526683 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
PUF60-208ENST00000526683 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
PUF60-208ENST00000526683 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
PUF60-208ENST00000526683 LCE4AQ5TA78 99 aa4.46□□□□□ -1.69
PUF60-208ENST00000526683 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
PUF60-208ENST00000526683 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
PUF60-208ENST00000526683 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
PUF60-208ENST00000526683 MT4P47944 62 aa4.4□□□□□ -1.7
PUF60-208ENST00000526683 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
PUF60-208ENST00000526683 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
PUF60-208ENST00000526683 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
PUF60-208ENST00000526683 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
PUF60-208ENST00000526683 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
PUF60-208ENST00000526683 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
PUF60-208ENST00000526683 PRM1P04553 51 aa4.26□□□□□ -1.73
PUF60-208ENST00000526683 MT3P25713 68 aa4.23□□□□□ -1.73
PUF60-208ENST00000526683 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
PUF60-208ENST00000526683 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
PUF60-208ENST00000526683 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
PUF60-208ENST00000526683 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
PUF60-208ENST00000526683 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
PUF60-208ENST00000526683 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
PUF60-208ENST00000526683 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
PUF60-208ENST00000526683 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
PUF60-208ENST00000526683 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
PUF60-208ENST00000526683 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
PUF60-208ENST00000526683 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
PUF60-208ENST00000526683 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
PUF60-208ENST00000526683 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
PUF60-208ENST00000526683 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
PUF60-208ENST00000526683 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
PUF60-208ENST00000526683 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
PUF60-208ENST00000526683 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
PUF60-208ENST00000526683 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
PUF60-208ENST00000526683 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
PUF60-208ENST00000526683 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
PUF60-208ENST00000526683 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
PUF60-208ENST00000526683 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
PUF60-208ENST00000526683 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
PUF60-208ENST00000526683 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
PUF60-208ENST00000526683 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PUF60-208ENST00000526683 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
PUF60-208ENST00000526683 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms