RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-216ENST00000525997 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
PUM1-216ENST00000525997 ROMO1P60602 79 aa2.18□□□□□ -2.06
PUM1-216ENST00000525997 MT1XP80297 61 aa2.17□□□□□ -2.06
PUM1-216ENST00000525997 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
PUM1-216ENST00000525997 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
PUM1-216ENST00000525997 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
PUM1-216ENST00000525997 TNP1P09430 55 aa2.13□□□□□ -2.07
PUM1-216ENST00000525997 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
PUM1-216ENST00000525997 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
PUM1-216ENST00000525997 NEBP20929 6669 aa2.11□□□□□ -2.07
PUM1-216ENST00000525997 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
PUM1-216ENST00000525997 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
PUM1-216ENST00000525997 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
PUM1-216ENST00000525997 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
PUM1-216ENST00000525997 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
PUM1-216ENST00000525997 KRTAP2-2Q9BYT5 123 aa2.05□□□□□ -2.08
PUM1-216ENST00000525997 KRTAP2-1Q9BYU5 128 aa2.05□□□□□ -2.08
PUM1-216ENST00000525997 KMT2DO14686 5537 aa2.04□□□□□ -2.08
PUM1-216ENST00000525997 PP632Q6XCG6 107 aa2.04□□□□□ -2.08
PUM1-216ENST00000525997 KRTAP5-9P26371 169 aa2.03□□□□□ -2.08
PUM1-216ENST00000525997 MT3P25713 68 aa2□□□□□ -2.09
PUM1-216ENST00000525997 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
PUM1-216ENST00000525997 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
PUM1-216ENST00000525997 LUZP6Q538Z0 58 aa1.98□□□□□ -2.09
PUM1-216ENST00000525997 SPRR2EP22531 72 aa1.95□□□□□ -2.1
PUM1-216ENST00000525997 SPRR2BP35325 72 aa1.95□□□□□ -2.1
PUM1-216ENST00000525997 SPRR2AP35326 72 aa1.95□□□□□ -2.1
PUM1-216ENST00000525997 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
PUM1-216ENST00000525997 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
PUM1-216ENST00000525997 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
PUM1-216ENST00000525997 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
PUM1-216ENST00000525997 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
PUM1-216ENST00000525997 MT1EP04732 61 aa1.92□□□□□ -2.1
PUM1-216ENST00000525997 SPRR2DP22532 72 aa1.9□□□□□ -2.11
PUM1-216ENST00000525997 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
PUM1-216ENST00000525997 MT1GP13640 62 aa1.88□□□□□ -2.11
PUM1-216ENST00000525997 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
PUM1-216ENST00000525997 MT1LQ93083 61 aa1.87□□□□□ -2.11
PUM1-216ENST00000525997 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
PUM1-216ENST00000525997 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
PUM1-216ENST00000525997 MT1MQ8N339 61 aa1.82□□□□□ -2.12
PUM1-216ENST00000525997 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
PUM1-216ENST00000525997 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
PUM1-216ENST00000525997 LCE3CQ5T5A8 94 aa1.8□□□□□ -2.12
PUM1-216ENST00000525997 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
PUM1-216ENST00000525997 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
PUM1-216ENST00000525997 INE1O15225 51 aa1.76□□□□□ -2.13
PUM1-216ENST00000525997 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
PUM1-216ENST00000525997 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
PUM1-216ENST00000525997 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
PUM1-216ENST00000525997 MT4P47944 62 aa1.68□□□□□ -2.14
PUM1-216ENST00000525997 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
PUM1-216ENST00000525997 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
PUM1-216ENST00000525997 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
PUM1-216ENST00000525997 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
PUM1-216ENST00000525997 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
PUM1-216ENST00000525997 MT1AP04731 61 aa1.61□□□□□ -2.15
PUM1-216ENST00000525997 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
PUM1-216ENST00000525997 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
PUM1-216ENST00000525997 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
PUM1-216ENST00000525997 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
PUM1-216ENST00000525997 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
PUM1-216ENST00000525997 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
PUM1-216ENST00000525997 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
PUM1-216ENST00000525997 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
PUM1-216ENST00000525997 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
PUM1-216ENST00000525997 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
PUM1-216ENST00000525997 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
PUM1-216ENST00000525997 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
PUM1-216ENST00000525997 OBSCNQ5VST9 7968 aa1.28□□□□□ -2.21
PUM1-216ENST00000525997 LCE1CQ5T751 118 aa1.22□□□□□ -2.21
PUM1-216ENST00000525997 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
PUM1-216ENST00000525997 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
PUM1-216ENST00000525997 PRM1P04553 51 aa1.05□□□□□ -2.24
PUM1-216ENST00000525997 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
PUM1-216ENST00000525997 MUC19Q7Z5P9 8384 aa0.89□□□□□ -2.27
PUM1-216ENST00000525997 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
PUM1-216ENST00000525997 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms