RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SPRR2AP35326 72 aa5.72□□□□□ -1.49
TSPAN4-213ENST00000524895 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
TSPAN4-213ENST00000524895 MDN1Q9NU22 5596 aa5.7□□□□□ -1.5
TSPAN4-213ENST00000524895 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
TSPAN4-213ENST00000524895 MT1LQ93083 61 aa5.66□□□□□ -1.5
TSPAN4-213ENST00000524895 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
TSPAN4-213ENST00000524895 NEBP20929 6669 aa5.6□□□□□ -1.51
TSPAN4-213ENST00000524895 MT1GP13640 62 aa5.58□□□□□ -1.52
TSPAN4-213ENST00000524895 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
TSPAN4-213ENST00000524895 SVIPQ8NHG7 77 aa5.55□□□□□ -1.52
TSPAN4-213ENST00000524895 SPRR2DP22532 72 aa5.53□□□□□ -1.52
TSPAN4-213ENST00000524895 MT1MQ8N339 61 aa5.51□□□□□ -1.53
TSPAN4-213ENST00000524895 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
TSPAN4-213ENST00000524895 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
TSPAN4-213ENST00000524895 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
TSPAN4-213ENST00000524895 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
TSPAN4-213ENST00000524895 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
TSPAN4-213ENST00000524895 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
TSPAN4-213ENST00000524895 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
TSPAN4-213ENST00000524895 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
TSPAN4-213ENST00000524895 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
TSPAN4-213ENST00000524895 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
TSPAN4-213ENST00000524895 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
TSPAN4-213ENST00000524895 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
TSPAN4-213ENST00000524895 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
TSPAN4-213ENST00000524895 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
TSPAN4-213ENST00000524895 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
TSPAN4-213ENST00000524895 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
TSPAN4-213ENST00000524895 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
TSPAN4-213ENST00000524895 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
TSPAN4-213ENST00000524895 MT1AP04731 61 aa4.82□□□□□ -1.64
TSPAN4-213ENST00000524895 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
TSPAN4-213ENST00000524895 MT4P47944 62 aa4.79□□□□□ -1.64
TSPAN4-213ENST00000524895 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
TSPAN4-213ENST00000524895 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
TSPAN4-213ENST00000524895 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
TSPAN4-213ENST00000524895 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
TSPAN4-213ENST00000524895 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
TSPAN4-213ENST00000524895 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
TSPAN4-213ENST00000524895 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
TSPAN4-213ENST00000524895 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
TSPAN4-213ENST00000524895 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
TSPAN4-213ENST00000524895 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
TSPAN4-213ENST00000524895 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
TSPAN4-213ENST00000524895 MT3P25713 68 aa4.39□□□□□ -1.71
TSPAN4-213ENST00000524895 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
TSPAN4-213ENST00000524895 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
TSPAN4-213ENST00000524895 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
TSPAN4-213ENST00000524895 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
TSPAN4-213ENST00000524895 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
TSPAN4-213ENST00000524895 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
TSPAN4-213ENST00000524895 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
TSPAN4-213ENST00000524895 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
TSPAN4-213ENST00000524895 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TSPAN4-213ENST00000524895 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
TSPAN4-213ENST00000524895 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
TSPAN4-213ENST00000524895 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
TSPAN4-213ENST00000524895 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
TSPAN4-213ENST00000524895 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
TSPAN4-213ENST00000524895 INE1O15225 51 aa3.68□□□□□ -1.82
TSPAN4-213ENST00000524895 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
TSPAN4-213ENST00000524895 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
TSPAN4-213ENST00000524895 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
TSPAN4-213ENST00000524895 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TSPAN4-213ENST00000524895 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
TSPAN4-213ENST00000524895 H3BS24 57 aa3.36□□□□□ -1.87
TSPAN4-213ENST00000524895 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
TSPAN4-213ENST00000524895 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
TSPAN4-213ENST00000524895 PRM1P04553 51 aa3.25□□□□□ -1.89
TSPAN4-213ENST00000524895 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
TSPAN4-213ENST00000524895 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
TSPAN4-213ENST00000524895 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
TSPAN4-213ENST00000524895 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
TSPAN4-213ENST00000524895 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
TSPAN4-213ENST00000524895 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
TSPAN4-213ENST00000524895 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
TSPAN4-213ENST00000524895 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
TSPAN4-213ENST00000524895 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 105.8 ms