RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 KRTAP20-1Q3LI63 56 aa1.38□□□□□ -2.19
CTNND1-209ENST00000524579 CYP4F30PQ9H0H9 118 aa1.38□□□□□ -2.19
CTNND1-209ENST00000524579 KMT2DO14686 5537 aa1.37□□□□□ -2.19
CTNND1-209ENST00000524579 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
CTNND1-209ENST00000524579 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
CTNND1-209ENST00000524579 CHKB-CPT1BH3BT56 60 aa1.36□□□□□ -2.19
CTNND1-209ENST00000524579 M0R2T5 61 aa1.36□□□□□ -2.19
CTNND1-209ENST00000524579 ACYP2P14621 99 aa1.36□□□□□ -2.19
CTNND1-209ENST00000524579 SPINK7P58062 85 aa1.36□□□□□ -2.19
CTNND1-209ENST00000524579 RPS28P62857 69 aaKnown RBP1.36□□□□□ -2.19
CTNND1-209ENST00000524579 COA5Q86WW8 74 aa1.36□□□□□ -2.19
CTNND1-209ENST00000524579 BRK1Q8WUW1 75 aa1.36□□□□□ -2.19
CTNND1-209ENST00000524579 DMAC1Q96GE9 116 aa1.34□□□□□ -2.19
CTNND1-209ENST00000524579 Q1T7F1 81 aa1.33□□□□□ -2.2
CTNND1-209ENST00000524579 KRTAP19-6Q3LI70 58 aa1.33□□□□□ -2.2
CTNND1-209ENST00000524579 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
CTNND1-209ENST00000524579 FLGP20930 4061 aaPredicted RBP1.32□□□□□ -2.2
CTNND1-209ENST00000524579 ROMO1P60602 79 aa1.32□□□□□ -2.2
CTNND1-209ENST00000524579 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
CTNND1-209ENST00000524579 PRR15LQ9BU68 103 aa1.32□□□□□ -2.2
CTNND1-209ENST00000524579 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
CTNND1-209ENST00000524579 SPTSSBQ8NFR3 76 aa1.31□□□□□ -2.2
CTNND1-209ENST00000524579 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
CTNND1-209ENST00000524579 A0A1B0GU69 56 aa1.3□□□□□ -2.2
CTNND1-209ENST00000524579 LINC01558Q9Y6Z2 57 aa1.3□□□□□ -2.2
CTNND1-209ENST00000524579 S4R3F8 94 aa1.3□□□□□ -2.2
CTNND1-209ENST00000524579 H1FX-AS1Q4G0G2 97 aa1.29□□□□□ -2.2
CTNND1-209ENST00000524579 Q5VV11 94 aa1.29□□□□□ -2.2
CTNND1-209ENST00000524579 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
CTNND1-209ENST00000524579 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
CTNND1-209ENST00000524579 MT2AP02795 61 aa1.27□□□□□ -2.21
CTNND1-209ENST00000524579 KRTAP2-1Q9BYU5 128 aa1.26□□□□□ -2.21
CTNND1-209ENST00000524579 UQCR11O14957 56 aa1.25□□□□□ -2.21
CTNND1-209ENST00000524579 MT1FP04733 61 aa1.25□□□□□ -2.21
CTNND1-209ENST00000524579 MIR22HGQ0VDD5 57 aa1.25□□□□□ -2.21
CTNND1-209ENST00000524579 CSAG1Q6PB30 78 aa1.25□□□□□ -2.21
CTNND1-209ENST00000524579 CDC42SE1Q9NRR8 79 aa1.25□□□□□ -2.21
CTNND1-209ENST00000524579 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
CTNND1-209ENST00000524579 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
CTNND1-209ENST00000524579 A0A0D9SG42 100 aa1.22□□□□□ -2.21
CTNND1-209ENST00000524579 H0YAA0 97 aa1.21□□□□□ -2.22
CTNND1-209ENST00000524579 M0QZ58 72 aa1.2□□□□□ -2.22
CTNND1-209ENST00000524579 INE1O15225 51 aa1.18□□□□□ -2.22
CTNND1-209ENST00000524579 A6NN06 94 aa1.17□□□□□ -2.22
CTNND1-209ENST00000524579 SPRR2EP22531 72 aa1.16□□□□□ -2.22
CTNND1-209ENST00000524579 SPRR2BP35325 72 aa1.16□□□□□ -2.22
CTNND1-209ENST00000524579 SPRR2AP35326 72 aa1.16□□□□□ -2.22
CTNND1-209ENST00000524579 MUC5BQ9HC84 5762 aaPredicted RBP1.15□□□□□ -2.23
CTNND1-209ENST00000524579 CRIPTQ9P021 101 aa1.14□□□□□ -2.23
CTNND1-209ENST00000524579 SPRR2DP22532 72 aa1.13□□□□□ -2.23
CTNND1-209ENST00000524579 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
CTNND1-209ENST00000524579 PLAC4Q8WY50 150 aa1.12□□□□□ -2.23
CTNND1-209ENST00000524579 SPRR2GQ9BYE4 73 aa1.11□□□□□ -2.23
CTNND1-209ENST00000524579 MT1BP07438 61 aa1.1□□□□□ -2.23
CTNND1-209ENST00000524579 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CTNND1-209ENST00000524579 C10orf95Q9H7T3 257 aa1.1□□□□□ -2.23
CTNND1-209ENST00000524579 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
CTNND1-209ENST00000524579 TNP1P09430 55 aa1.07□□□□□ -2.24
CTNND1-209ENST00000524579 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
CTNND1-209ENST00000524579 MT1XP80297 61 aa1.04□□□□□ -2.24
CTNND1-209ENST00000524579 MUC5ACP98088 5654 aa1.03□□□□□ -2.24
CTNND1-209ENST00000524579 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
CTNND1-209ENST00000524579 MT4P47944 62 aa0.99□□□□□ -2.25
CTNND1-209ENST00000524579 KRTAP19-5Q3LI72 72 aa0.96□□□□□ -2.26
CTNND1-209ENST00000524579 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
CTNND1-209ENST00000524579 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
CTNND1-209ENST00000524579 KRTAP19-3Q7Z4W3 81 aa0.92□□□□□ -2.26
CTNND1-209ENST00000524579 MT1EP04732 61 aa0.91□□□□□ -2.26
CTNND1-209ENST00000524579 MT1GP13640 62 aa0.9□□□□□ -2.27
CTNND1-209ENST00000524579 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
CTNND1-209ENST00000524579 MT1LQ93083 61 aa0.9□□□□□ -2.27
CTNND1-209ENST00000524579 MT1MQ8N339 61 aa0.87□□□□□ -2.27
CTNND1-209ENST00000524579 MT1AP04731 61 aa0.77□□□□□ -2.29
CTNND1-209ENST00000524579 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
CTNND1-209ENST00000524579 KRTAP6-2Q3LI66 62 aa0.7□□□□□ -2.3
CTNND1-209ENST00000524579 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
CTNND1-209ENST00000524579 PRM1P04553 51 aa0.6□□□□□ -2.31
CTNND1-209ENST00000524579 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms