RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 MT1GP13640 62 aa3.49□□□□□ -1.85
VPS13B-212ENST00000524330 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
VPS13B-212ENST00000524330 KMT2DO14686 5537 aa3.43□□□□□ -1.86
VPS13B-212ENST00000524330 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
VPS13B-212ENST00000524330 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
VPS13B-212ENST00000524330 MT1MQ8N339 61 aa3.38□□□□□ -1.87
VPS13B-212ENST00000524330 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
VPS13B-212ENST00000524330 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-212ENST00000524330 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
VPS13B-212ENST00000524330 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
VPS13B-212ENST00000524330 SPRR2EP22531 72 aa3.32□□□□□ -1.88
VPS13B-212ENST00000524330 SPRR2BP35325 72 aa3.32□□□□□ -1.88
VPS13B-212ENST00000524330 SPRR2AP35326 72 aa3.32□□□□□ -1.88
VPS13B-212ENST00000524330 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
VPS13B-212ENST00000524330 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
VPS13B-212ENST00000524330 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
VPS13B-212ENST00000524330 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
VPS13B-212ENST00000524330 SPRR2DP22532 72 aa3.21□□□□□ -1.9
VPS13B-212ENST00000524330 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
VPS13B-212ENST00000524330 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
VPS13B-212ENST00000524330 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
VPS13B-212ENST00000524330 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
VPS13B-212ENST00000524330 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
VPS13B-212ENST00000524330 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
VPS13B-212ENST00000524330 INE1O15225 51 aa3.07□□□□□ -1.92
VPS13B-212ENST00000524330 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
VPS13B-212ENST00000524330 MT1AP04731 61 aa3.05□□□□□ -1.92
VPS13B-212ENST00000524330 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
VPS13B-212ENST00000524330 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
VPS13B-212ENST00000524330 NEBP20929 6669 aa2.96□□□□□ -1.93
VPS13B-212ENST00000524330 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
VPS13B-212ENST00000524330 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
VPS13B-212ENST00000524330 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
VPS13B-212ENST00000524330 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
VPS13B-212ENST00000524330 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
VPS13B-212ENST00000524330 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
VPS13B-212ENST00000524330 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
VPS13B-212ENST00000524330 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
VPS13B-212ENST00000524330 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
VPS13B-212ENST00000524330 MT3P25713 68 aa2.8□□□□□ -1.96
VPS13B-212ENST00000524330 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
VPS13B-212ENST00000524330 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
VPS13B-212ENST00000524330 MT4P47944 62 aa2.73□□□□□ -1.97
VPS13B-212ENST00000524330 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
VPS13B-212ENST00000524330 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
VPS13B-212ENST00000524330 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
VPS13B-212ENST00000524330 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
VPS13B-212ENST00000524330 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
VPS13B-212ENST00000524330 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
VPS13B-212ENST00000524330 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
VPS13B-212ENST00000524330 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
VPS13B-212ENST00000524330 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
VPS13B-212ENST00000524330 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
VPS13B-212ENST00000524330 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
VPS13B-212ENST00000524330 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
VPS13B-212ENST00000524330 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
VPS13B-212ENST00000524330 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
VPS13B-212ENST00000524330 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
VPS13B-212ENST00000524330 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
VPS13B-212ENST00000524330 PRM1P04553 51 aa2.31□□□□□ -2.04
VPS13B-212ENST00000524330 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
VPS13B-212ENST00000524330 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
VPS13B-212ENST00000524330 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
VPS13B-212ENST00000524330 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
VPS13B-212ENST00000524330 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
VPS13B-212ENST00000524330 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
VPS13B-212ENST00000524330 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
VPS13B-212ENST00000524330 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
VPS13B-212ENST00000524330 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
VPS13B-212ENST00000524330 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
VPS13B-212ENST00000524330 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
VPS13B-212ENST00000524330 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
VPS13B-212ENST00000524330 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
VPS13B-212ENST00000524330 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
VPS13B-212ENST00000524330 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
VPS13B-212ENST00000524330 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
VPS13B-212ENST00000524330 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
VPS13B-212ENST00000524330 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 59.1 ms