RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
SREK1-215ENST00000524111 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
SREK1-215ENST00000524111 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
SREK1-215ENST00000524111 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
SREK1-215ENST00000524111 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
SREK1-215ENST00000524111 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
SREK1-215ENST00000524111 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
SREK1-215ENST00000524111 LCE3BQ5TA77 95 aa3.02□□□□□ -1.93
SREK1-215ENST00000524111 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
SREK1-215ENST00000524111 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
SREK1-215ENST00000524111 MT1EP04732 61 aa2.99□□□□□ -1.93
SREK1-215ENST00000524111 MT1LQ93083 61 aa2.99□□□□□ -1.93
SREK1-215ENST00000524111 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
SREK1-215ENST00000524111 MT1GP13640 62 aa2.98□□□□□ -1.93
SREK1-215ENST00000524111 INE1O15225 51 aa2.96□□□□□ -1.94
SREK1-215ENST00000524111 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
SREK1-215ENST00000524111 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
SREK1-215ENST00000524111 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
SREK1-215ENST00000524111 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
SREK1-215ENST00000524111 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
SREK1-215ENST00000524111 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
SREK1-215ENST00000524111 LCE1DQ5T752 114 aa2.86□□□□□ -1.95
SREK1-215ENST00000524111 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
SREK1-215ENST00000524111 MT1MQ8N339 61 aa2.83□□□□□ -1.96
SREK1-215ENST00000524111 MDN1Q9NU22 5596 aa2.78□□□□□ -1.97
SREK1-215ENST00000524111 SPRR2EP22531 72 aa2.75□□□□□ -1.97
SREK1-215ENST00000524111 SPRR2BP35325 72 aa2.75□□□□□ -1.97
SREK1-215ENST00000524111 SPRR2AP35326 72 aa2.75□□□□□ -1.97
SREK1-215ENST00000524111 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
SREK1-215ENST00000524111 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SREK1-215ENST00000524111 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SREK1-215ENST00000524111 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SREK1-215ENST00000524111 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
SREK1-215ENST00000524111 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
SREK1-215ENST00000524111 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
SREK1-215ENST00000524111 SPRR2DP22532 72 aa2.62□□□□□ -1.99
SREK1-215ENST00000524111 LCE1AQ5T7P2 110 aa2.59□□□□□ -1.99
SREK1-215ENST00000524111 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
SREK1-215ENST00000524111 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
SREK1-215ENST00000524111 MT1AP04731 61 aa2.5□□□□□ -2.01
SREK1-215ENST00000524111 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
SREK1-215ENST00000524111 MT4P47944 62 aa2.43□□□□□ -2.02
SREK1-215ENST00000524111 KRTAP5-9P26371 169 aa2.42□□□□□ -2.02
SREK1-215ENST00000524111 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
SREK1-215ENST00000524111 KRTAP9-7A8MTY7 169 aa2.37□□□□□ -2.03
SREK1-215ENST00000524111 PRM1P04553 51 aa2.37□□□□□ -2.03
SREK1-215ENST00000524111 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
SREK1-215ENST00000524111 MT3P25713 68 aa2.35□□□□□ -2.03
SREK1-215ENST00000524111 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
SREK1-215ENST00000524111 NEBP20929 6669 aa2.25□□□□□ -2.05
SREK1-215ENST00000524111 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
SREK1-215ENST00000524111 LCE4AQ5TA78 99 aa2.17□□□□□ -2.06
SREK1-215ENST00000524111 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
SREK1-215ENST00000524111 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
SREK1-215ENST00000524111 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
SREK1-215ENST00000524111 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
SREK1-215ENST00000524111 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
SREK1-215ENST00000524111 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
SREK1-215ENST00000524111 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
SREK1-215ENST00000524111 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
SREK1-215ENST00000524111 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
SREK1-215ENST00000524111 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
SREK1-215ENST00000524111 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
SREK1-215ENST00000524111 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
SREK1-215ENST00000524111 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SREK1-215ENST00000524111 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
SREK1-215ENST00000524111 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
SREK1-215ENST00000524111 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
SREK1-215ENST00000524111 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
SREK1-215ENST00000524111 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
SREK1-215ENST00000524111 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
SREK1-215ENST00000524111 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
SREK1-215ENST00000524111 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
SREK1-215ENST00000524111 LCE1FQ5T754 118 aa1.59□□□□□ -2.15
SREK1-215ENST00000524111 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
SREK1-215ENST00000524111 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
SREK1-215ENST00000524111 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
SREK1-215ENST00000524111 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms