RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
SPIDR-222ENST00000524006 MT1BP07438 61 aa4.44□□□□□ -1.7
SPIDR-222ENST00000524006 NEBP20929 6669 aa4.4□□□□□ -1.71
SPIDR-222ENST00000524006 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
SPIDR-222ENST00000524006 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
SPIDR-222ENST00000524006 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
SPIDR-222ENST00000524006 MT1XP80297 61 aa4.36□□□□□ -1.71
SPIDR-222ENST00000524006 KRTAP10-12P60413 245 aa4.34□□□□□ -1.71
SPIDR-222ENST00000524006 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
SPIDR-222ENST00000524006 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
SPIDR-222ENST00000524006 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
SPIDR-222ENST00000524006 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
SPIDR-222ENST00000524006 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
SPIDR-222ENST00000524006 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
SPIDR-222ENST00000524006 KMT2DO14686 5537 aa4.2□□□□□ -1.74
SPIDR-222ENST00000524006 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
SPIDR-222ENST00000524006 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
SPIDR-222ENST00000524006 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
SPIDR-222ENST00000524006 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
SPIDR-222ENST00000524006 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
SPIDR-222ENST00000524006 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
SPIDR-222ENST00000524006 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
SPIDR-222ENST00000524006 SPRR2EP22531 72 aa3.9□□□□□ -1.79
SPIDR-222ENST00000524006 SPRR2BP35325 72 aa3.9□□□□□ -1.79
SPIDR-222ENST00000524006 SPRR2AP35326 72 aa3.9□□□□□ -1.79
SPIDR-222ENST00000524006 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
SPIDR-222ENST00000524006 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
SPIDR-222ENST00000524006 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
SPIDR-222ENST00000524006 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
SPIDR-222ENST00000524006 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
SPIDR-222ENST00000524006 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
SPIDR-222ENST00000524006 MT1EP04732 61 aa3.83□□□□□ -1.8
SPIDR-222ENST00000524006 MT1LQ93083 61 aa3.79□□□□□ -1.8
SPIDR-222ENST00000524006 SPRR2DP22532 72 aa3.77□□□□□ -1.81
SPIDR-222ENST00000524006 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
SPIDR-222ENST00000524006 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
SPIDR-222ENST00000524006 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
SPIDR-222ENST00000524006 MT1GP13640 62 aa3.64□□□□□ -1.83
SPIDR-222ENST00000524006 MT1MQ8N339 61 aa3.61□□□□□ -1.83
SPIDR-222ENST00000524006 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
SPIDR-222ENST00000524006 MT3P25713 68 aa3.57□□□□□ -1.84
SPIDR-222ENST00000524006 INE1O15225 51 aa3.55□□□□□ -1.84
SPIDR-222ENST00000524006 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
SPIDR-222ENST00000524006 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
SPIDR-222ENST00000524006 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
SPIDR-222ENST00000524006 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
SPIDR-222ENST00000524006 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
SPIDR-222ENST00000524006 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
SPIDR-222ENST00000524006 MT4P47944 62 aa3.32□□□□□ -1.88
SPIDR-222ENST00000524006 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
SPIDR-222ENST00000524006 MT1AP04731 61 aa3.25□□□□□ -1.89
SPIDR-222ENST00000524006 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SPIDR-222ENST00000524006 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
SPIDR-222ENST00000524006 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
SPIDR-222ENST00000524006 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
SPIDR-222ENST00000524006 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
SPIDR-222ENST00000524006 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SPIDR-222ENST00000524006 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
SPIDR-222ENST00000524006 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
SPIDR-222ENST00000524006 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
SPIDR-222ENST00000524006 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SPIDR-222ENST00000524006 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
SPIDR-222ENST00000524006 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
SPIDR-222ENST00000524006 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
SPIDR-222ENST00000524006 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
SPIDR-222ENST00000524006 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
SPIDR-222ENST00000524006 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SPIDR-222ENST00000524006 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SPIDR-222ENST00000524006 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SPIDR-222ENST00000524006 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
SPIDR-222ENST00000524006 PRM1P04553 51 aa2.67□□□□□ -1.98
SPIDR-222ENST00000524006 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
SPIDR-222ENST00000524006 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
SPIDR-222ENST00000524006 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
SPIDR-222ENST00000524006 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
SPIDR-222ENST00000524006 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SPIDR-222ENST00000524006 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SPIDR-222ENST00000524006 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 233.9 ms