RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
SDC2-208ENST00000523877 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
SDC2-208ENST00000523877 MT1HL1P0DM35 61 aa2.46□□□□□ -2.02
SDC2-208ENST00000523877 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
SDC2-208ENST00000523877 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
SDC2-208ENST00000523877 DNAH8Q96JB1 4490 aa2.4□□□□□ -2.02
SDC2-208ENST00000523877 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
SDC2-208ENST00000523877 LPAP08519 4548 aa2.39□□□□□ -2.03
SDC2-208ENST00000523877 M0R2T5 61 aa2.38□□□□□ -2.03
SDC2-208ENST00000523877 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
SDC2-208ENST00000523877 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
SDC2-208ENST00000523877 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SDC2-208ENST00000523877 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
SDC2-208ENST00000523877 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
SDC2-208ENST00000523877 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
SDC2-208ENST00000523877 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
SDC2-208ENST00000523877 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
SDC2-208ENST00000523877 USH2AO75445 5202 aa2.27□□□□□ -2.05
SDC2-208ENST00000523877 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
SDC2-208ENST00000523877 MUC17Q685J3 4493 aa2.22□□□□□ -2.05
SDC2-208ENST00000523877 NEBP20929 6669 aa2.22□□□□□ -2.05
SDC2-208ENST00000523877 KRTAP20-1Q3LI63 56 aa2.22□□□□□ -2.05
SDC2-208ENST00000523877 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
SDC2-208ENST00000523877 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
SDC2-208ENST00000523877 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
SDC2-208ENST00000523877 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
SDC2-208ENST00000523877 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
SDC2-208ENST00000523877 MT1HP80294 61 aa2.13□□□□□ -2.07
SDC2-208ENST00000523877 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
SDC2-208ENST00000523877 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
SDC2-208ENST00000523877 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
SDC2-208ENST00000523877 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
SDC2-208ENST00000523877 KRTAP4-1Q9BYQ7 146 aa2.04□□□□□ -2.08
SDC2-208ENST00000523877 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.08
SDC2-208ENST00000523877 KMT2DO14686 5537 aa2.02□□□□□ -2.09
SDC2-208ENST00000523877 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
SDC2-208ENST00000523877 PRM1P04553 51 aa1.98□□□□□ -2.09
SDC2-208ENST00000523877 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
SDC2-208ENST00000523877 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
SDC2-208ENST00000523877 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
SDC2-208ENST00000523877 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SDC2-208ENST00000523877 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
SDC2-208ENST00000523877 MT2AP02795 61 aa1.87□□□□□ -2.11
SDC2-208ENST00000523877 MT1FP04733 61 aa1.85□□□□□ -2.11
SDC2-208ENST00000523877 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
SDC2-208ENST00000523877 MT1AP04731 61 aa1.8□□□□□ -2.12
SDC2-208ENST00000523877 SPRR2EP22531 72 aa1.79□□□□□ -2.12
SDC2-208ENST00000523877 SPRR2BP35325 72 aa1.79□□□□□ -2.12
SDC2-208ENST00000523877 SPRR2AP35326 72 aa1.79□□□□□ -2.12
SDC2-208ENST00000523877 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
SDC2-208ENST00000523877 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SDC2-208ENST00000523877 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
SDC2-208ENST00000523877 SPRR2DP22532 72 aa1.75□□□□□ -2.13
SDC2-208ENST00000523877 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
SDC2-208ENST00000523877 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
SDC2-208ENST00000523877 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
SDC2-208ENST00000523877 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
SDC2-208ENST00000523877 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SDC2-208ENST00000523877 MT1EP04732 61 aa1.61□□□□□ -2.15
SDC2-208ENST00000523877 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
SDC2-208ENST00000523877 MT1BP07438 61 aa1.59□□□□□ -2.15
SDC2-208ENST00000523877 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
SDC2-208ENST00000523877 SYNE1Q8NF91 8797 aaKnown RBP1.56□□□□□ -2.16
SDC2-208ENST00000523877 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
SDC2-208ENST00000523877 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
SDC2-208ENST00000523877 KRTAP19-8Q3LI54 63 aa1.55□□□□□ -2.16
SDC2-208ENST00000523877 MT1LQ93083 61 aa1.55□□□□□ -2.16
SDC2-208ENST00000523877 MT1XP80297 61 aa1.54□□□□□ -2.16
SDC2-208ENST00000523877 MT4P47944 62 aa1.52□□□□□ -2.17
SDC2-208ENST00000523877 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SDC2-208ENST00000523877 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
SDC2-208ENST00000523877 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
SDC2-208ENST00000523877 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
SDC2-208ENST00000523877 MT1GP13640 62 aa1.31□□□□□ -2.2
SDC2-208ENST00000523877 MT1MQ8N339 61 aa1.22□□□□□ -2.21
SDC2-208ENST00000523877 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
SDC2-208ENST00000523877 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
SDC2-208ENST00000523877 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms