RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 Q6ZRN7 208 aaPredicted RBP2.06□□□□□ -2.08
TVP23C-207ENST00000523573 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
TVP23C-207ENST00000523573 DNAH8Q96JB1 4490 aa2.03□□□□□ -2.09
TVP23C-207ENST00000523573 A0A0D9SG42 100 aa2.01□□□□□ -2.09
TVP23C-207ENST00000523573 MT1HL1P0DM35 61 aa2.01□□□□□ -2.09
TVP23C-207ENST00000523573 KRTAP10-4P60372 401 aaPredicted RBP2.01□□□□□ -2.09
TVP23C-207ENST00000523573 PLAC4Q8WY50 150 aa2.01□□□□□ -2.09
TVP23C-207ENST00000523573 S4R3F8 94 aa2.01□□□□□ -2.09
TVP23C-207ENST00000523573 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
TVP23C-207ENST00000523573 RPS29P62273 56 aaKnown RBP1.99□□□□□ -2.09
TVP23C-207ENST00000523573 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
TVP23C-207ENST00000523573 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.1
TVP23C-207ENST00000523573 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
TVP23C-207ENST00000523573 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
TVP23C-207ENST00000523573 M0QZ58 72 aa1.94□□□□□ -2.1
TVP23C-207ENST00000523573 C9orf92A6NGG3 77 aa1.92□□□□□ -2.1
TVP23C-207ENST00000523573 LPAP08519 4548 aa1.92□□□□□ -2.1
TVP23C-207ENST00000523573 R4GN34 69 aa1.91□□□□□ -2.1
TVP23C-207ENST00000523573 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
TVP23C-207ENST00000523573 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
TVP23C-207ENST00000523573 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
TVP23C-207ENST00000523573 INE1O15225 51 aa1.85□□□□□ -2.11
TVP23C-207ENST00000523573 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
TVP23C-207ENST00000523573 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
TVP23C-207ENST00000523573 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
TVP23C-207ENST00000523573 USH2AO75445 5202 aa1.76□□□□□ -2.13
TVP23C-207ENST00000523573 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
TVP23C-207ENST00000523573 TNP1P09430 55 aa1.73□□□□□ -2.13
TVP23C-207ENST00000523573 MT1HP80294 61 aa1.73□□□□□ -2.13
TVP23C-207ENST00000523573 SYNE2Q8WXH0 6885 aaKnown RBP1.71□□□□□ -2.14
TVP23C-207ENST00000523573 M0R2T5 61 aa1.7□□□□□ -2.14
TVP23C-207ENST00000523573 KRTAP20-1Q3LI63 56 aa1.7□□□□□ -2.14
TVP23C-207ENST00000523573 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
TVP23C-207ENST00000523573 KRTAP19-2Q3LHN2 52 aa1.68□□□□□ -2.14
TVP23C-207ENST00000523573 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.15
TVP23C-207ENST00000523573 NEBP20929 6669 aa1.64□□□□□ -2.15
TVP23C-207ENST00000523573 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
TVP23C-207ENST00000523573 KRTAP2-3P0C7H8 128 aa1.61□□□□□ -2.15
TVP23C-207ENST00000523573 KRTAP2-4Q9BYR9 128 aa1.61□□□□□ -2.15
TVP23C-207ENST00000523573 KMT2DO14686 5537 aa1.58□□□□□ -2.16
TVP23C-207ENST00000523573 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
TVP23C-207ENST00000523573 MDN1Q9NU22 5596 aa1.54□□□□□ -2.16
TVP23C-207ENST00000523573 MT2AP02795 61 aa1.54□□□□□ -2.16
TVP23C-207ENST00000523573 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
TVP23C-207ENST00000523573 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
TVP23C-207ENST00000523573 MT1FP04733 61 aa1.51□□□□□ -2.17
TVP23C-207ENST00000523573 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
TVP23C-207ENST00000523573 SPRR2EP22531 72 aa1.44□□□□□ -2.18
TVP23C-207ENST00000523573 SPRR2BP35325 72 aa1.44□□□□□ -2.18
TVP23C-207ENST00000523573 SPRR2AP35326 72 aa1.44□□□□□ -2.18
TVP23C-207ENST00000523573 SPRR2DP22532 72 aa1.4□□□□□ -2.19
TVP23C-207ENST00000523573 SPRR2FQ96RM1 72 aa1.4□□□□□ -2.19
TVP23C-207ENST00000523573 KRTAP19-8Q3LI54 63 aa1.38□□□□□ -2.19
TVP23C-207ENST00000523573 MT1XP80297 61 aa1.35□□□□□ -2.19
TVP23C-207ENST00000523573 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
TVP23C-207ENST00000523573 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
TVP23C-207ENST00000523573 MT1BP07438 61 aa1.33□□□□□ -2.2
TVP23C-207ENST00000523573 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
TVP23C-207ENST00000523573 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
TVP23C-207ENST00000523573 MT1EP04732 61 aa1.23□□□□□ -2.21
TVP23C-207ENST00000523573 MT1LQ93083 61 aa1.21□□□□□ -2.22
TVP23C-207ENST00000523573 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
TVP23C-207ENST00000523573 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
TVP23C-207ENST00000523573 MT1AP04731 61 aa1.19□□□□□ -2.22
TVP23C-207ENST00000523573 MT4P47944 62 aa1.19□□□□□ -2.22
TVP23C-207ENST00000523573 KRTAP19-7Q3SYF9 63 aa1.19□□□□□ -2.22
TVP23C-207ENST00000523573 PRM1P04553 51 aa1.16□□□□□ -2.22
TVP23C-207ENST00000523573 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
TVP23C-207ENST00000523573 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
TVP23C-207ENST00000523573 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
TVP23C-207ENST00000523573 MT1GP13640 62 aa1.13□□□□□ -2.23
TVP23C-207ENST00000523573 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
TVP23C-207ENST00000523573 MT1MQ8N339 61 aa1.07□□□□□ -2.24
TVP23C-207ENST00000523573 SYNE1Q8NF91 8797 aaKnown RBP1.05□□□□□ -2.24
TVP23C-207ENST00000523573 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
TVP23C-207ENST00000523573 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
TVP23C-207ENST00000523573 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
TVP23C-207ENST00000523573 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms