RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
SDCBP-212ENST00000523483 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
SDCBP-212ENST00000523483 SPRR2EP22531 72 aa3.35□□□□□ -1.87
SDCBP-212ENST00000523483 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SDCBP-212ENST00000523483 SPRR2BP35325 72 aa3.35□□□□□ -1.87
SDCBP-212ENST00000523483 SPRR2AP35326 72 aa3.35□□□□□ -1.87
SDCBP-212ENST00000523483 MT1LQ93083 61 aa3.31□□□□□ -1.88
SDCBP-212ENST00000523483 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
SDCBP-212ENST00000523483 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
SDCBP-212ENST00000523483 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
SDCBP-212ENST00000523483 NEBP20929 6669 aa3.24□□□□□ -1.89
SDCBP-212ENST00000523483 MT1GP13640 62 aa3.24□□□□□ -1.89
SDCBP-212ENST00000523483 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SDCBP-212ENST00000523483 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
SDCBP-212ENST00000523483 SPRR2DP22532 72 aa3.22□□□□□ -1.89
SDCBP-212ENST00000523483 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
SDCBP-212ENST00000523483 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SDCBP-212ENST00000523483 LCE3BQ5TA77 95 aa3.09□□□□□ -1.92
SDCBP-212ENST00000523483 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
SDCBP-212ENST00000523483 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
SDCBP-212ENST00000523483 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
SDCBP-212ENST00000523483 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SDCBP-212ENST00000523483 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
SDCBP-212ENST00000523483 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
SDCBP-212ENST00000523483 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
SDCBP-212ENST00000523483 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
SDCBP-212ENST00000523483 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
SDCBP-212ENST00000523483 H3BS24 57 aa2.97□□□□□ -1.93
SDCBP-212ENST00000523483 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
SDCBP-212ENST00000523483 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
SDCBP-212ENST00000523483 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
SDCBP-212ENST00000523483 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.94
SDCBP-212ENST00000523483 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
SDCBP-212ENST00000523483 MT4P47944 62 aa2.87□□□□□ -1.95
SDCBP-212ENST00000523483 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
SDCBP-212ENST00000523483 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
SDCBP-212ENST00000523483 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
SDCBP-212ENST00000523483 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
SDCBP-212ENST00000523483 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
SDCBP-212ENST00000523483 MT1AP04731 61 aa2.79□□□□□ -1.96
SDCBP-212ENST00000523483 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
SDCBP-212ENST00000523483 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
SDCBP-212ENST00000523483 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
SDCBP-212ENST00000523483 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
SDCBP-212ENST00000523483 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
SDCBP-212ENST00000523483 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
SDCBP-212ENST00000523483 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
SDCBP-212ENST00000523483 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
SDCBP-212ENST00000523483 MT3P25713 68 aa2.57□□□□□ -2
SDCBP-212ENST00000523483 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
SDCBP-212ENST00000523483 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
SDCBP-212ENST00000523483 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
SDCBP-212ENST00000523483 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
SDCBP-212ENST00000523483 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SDCBP-212ENST00000523483 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
SDCBP-212ENST00000523483 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.04
SDCBP-212ENST00000523483 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
SDCBP-212ENST00000523483 INE1O15225 51 aa2.24□□□□□ -2.05
SDCBP-212ENST00000523483 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
SDCBP-212ENST00000523483 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
SDCBP-212ENST00000523483 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SDCBP-212ENST00000523483 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
SDCBP-212ENST00000523483 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
SDCBP-212ENST00000523483 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SDCBP-212ENST00000523483 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SDCBP-212ENST00000523483 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
SDCBP-212ENST00000523483 PRM1P04553 51 aa2.03□□□□□ -2.09
SDCBP-212ENST00000523483 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
SDCBP-212ENST00000523483 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
SDCBP-212ENST00000523483 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
SDCBP-212ENST00000523483 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
SDCBP-212ENST00000523483 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
SDCBP-212ENST00000523483 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
SDCBP-212ENST00000523483 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
SDCBP-212ENST00000523483 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
SDCBP-212ENST00000523483 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SDCBP-212ENST00000523483 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms