RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
TOP1MT-217ENST00000523417 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
TOP1MT-217ENST00000523417 MT1MQ8N339 61 aa4.5□□□□□ -1.69
TOP1MT-217ENST00000523417 MT1LQ93083 61 aa4.49□□□□□ -1.69
TOP1MT-217ENST00000523417 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
TOP1MT-217ENST00000523417 COX7CP15954 63 aa4.44□□□□□ -1.7
TOP1MT-217ENST00000523417 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
TOP1MT-217ENST00000523417 H7BZZ5 65 aa4.42□□□□□ -1.7
TOP1MT-217ENST00000523417 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
TOP1MT-217ENST00000523417 MT4P47944 62 aa4.41□□□□□ -1.7
TOP1MT-217ENST00000523417 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.71
TOP1MT-217ENST00000523417 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
TOP1MT-217ENST00000523417 TNP1P09430 55 aa4.37□□□□□ -1.71
TOP1MT-217ENST00000523417 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
TOP1MT-217ENST00000523417 A0A1B0GU69 56 aa4.36□□□□□ -1.71
TOP1MT-217ENST00000523417 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
TOP1MT-217ENST00000523417 A8MU10 97 aa4.34□□□□□ -1.71
TOP1MT-217ENST00000523417 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
TOP1MT-217ENST00000523417 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
TOP1MT-217ENST00000523417 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
TOP1MT-217ENST00000523417 MT3P25713 68 aa4.22□□□□□ -1.73
TOP1MT-217ENST00000523417 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
TOP1MT-217ENST00000523417 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
TOP1MT-217ENST00000523417 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
TOP1MT-217ENST00000523417 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
TOP1MT-217ENST00000523417 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
TOP1MT-217ENST00000523417 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
TOP1MT-217ENST00000523417 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
TOP1MT-217ENST00000523417 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
TOP1MT-217ENST00000523417 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
TOP1MT-217ENST00000523417 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
TOP1MT-217ENST00000523417 UQCR11O14957 56 aa4.08□□□□□ -1.76
TOP1MT-217ENST00000523417 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
TOP1MT-217ENST00000523417 CCDC179H3BU77 68 aa4.06□□□□□ -1.76
TOP1MT-217ENST00000523417 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
TOP1MT-217ENST00000523417 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
TOP1MT-217ENST00000523417 TMEM258P61165 79 aa3.93□□□□□ -1.78
TOP1MT-217ENST00000523417 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
TOP1MT-217ENST00000523417 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
TOP1MT-217ENST00000523417 K7ERS5 55 aa3.9□□□□□ -1.79
TOP1MT-217ENST00000523417 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
TOP1MT-217ENST00000523417 MT1AP04731 61 aa3.83□□□□□ -1.8
TOP1MT-217ENST00000523417 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
TOP1MT-217ENST00000523417 V9GYY9 64 aa3.79□□□□□ -1.8
TOP1MT-217ENST00000523417 Q1T7F1 81 aa3.76□□□□□ -1.81
TOP1MT-217ENST00000523417 PSPHP1O15172 72 aa3.73□□□□□ -1.81
TOP1MT-217ENST00000523417 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
TOP1MT-217ENST00000523417 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
TOP1MT-217ENST00000523417 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
TOP1MT-217ENST00000523417 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
TOP1MT-217ENST00000523417 RPS28P62857 69 aaKnown RBP3.63□□□□□ -1.83
TOP1MT-217ENST00000523417 ROMO1P60602 79 aa3.61□□□□□ -1.83
TOP1MT-217ENST00000523417 A6NED7 52 aa3.59□□□□□ -1.83
TOP1MT-217ENST00000523417 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
TOP1MT-217ENST00000523417 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
TOP1MT-217ENST00000523417 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
TOP1MT-217ENST00000523417 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
TOP1MT-217ENST00000523417 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
TOP1MT-217ENST00000523417 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
TOP1MT-217ENST00000523417 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
TOP1MT-217ENST00000523417 LUZP6Q538Z0 58 aa3.42□□□□□ -1.86
TOP1MT-217ENST00000523417 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
TOP1MT-217ENST00000523417 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
TOP1MT-217ENST00000523417 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
TOP1MT-217ENST00000523417 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
TOP1MT-217ENST00000523417 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
TOP1MT-217ENST00000523417 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
TOP1MT-217ENST00000523417 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TOP1MT-217ENST00000523417 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
TOP1MT-217ENST00000523417 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TOP1MT-217ENST00000523417 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TOP1MT-217ENST00000523417 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
TOP1MT-217ENST00000523417 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
TOP1MT-217ENST00000523417 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
TOP1MT-217ENST00000523417 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
TOP1MT-217ENST00000523417 INE1O15225 51 aa1.91□□□□□ -2.1
TOP1MT-217ENST00000523417 PRM1P04553 51 aa1.8□□□□□ -2.12
TOP1MT-217ENST00000523417 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 229 ms