RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 MT2AP02795 61 aa2.85□□□□□ -1.95
LINC00534-203ENST00000523406 MT1FP04733 61 aa2.83□□□□□ -1.96
LINC00534-203ENST00000523406 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
LINC00534-203ENST00000523406 PLAC4Q8WY50 150 aa2.83□□□□□ -1.96
LINC00534-203ENST00000523406 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
LINC00534-203ENST00000523406 SPRR2GQ9BYE4 73 aa2.82□□□□□ -1.96
LINC00534-203ENST00000523406 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
LINC00534-203ENST00000523406 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
LINC00534-203ENST00000523406 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
LINC00534-203ENST00000523406 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
LINC00534-203ENST00000523406 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
LINC00534-203ENST00000523406 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
LINC00534-203ENST00000523406 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
LINC00534-203ENST00000523406 TNP1P09430 55 aa2.71□□□□□ -1.98
LINC00534-203ENST00000523406 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
LINC00534-203ENST00000523406 MT1BP07438 61 aa2.68□□□□□ -1.98
LINC00534-203ENST00000523406 CRCT1Q9UGL9 99 aa2.66□□□□□ -1.98
LINC00534-203ENST00000523406 PRO2289Q9P1D8 64 aa2.65□□□□□ -1.99
LINC00534-203ENST00000523406 MT1XP80297 61 aa2.61□□□□□ -1.99
LINC00534-203ENST00000523406 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
LINC00534-203ENST00000523406 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
LINC00534-203ENST00000523406 USH2AO75445 5202 aa2.56□□□□□ -2
LINC00534-203ENST00000523406 LCE1CQ5T751 118 aa2.54□□□□□ -2
LINC00534-203ENST00000523406 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
LINC00534-203ENST00000523406 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
LINC00534-203ENST00000523406 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
LINC00534-203ENST00000523406 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
LINC00534-203ENST00000523406 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.02
LINC00534-203ENST00000523406 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
LINC00534-203ENST00000523406 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
LINC00534-203ENST00000523406 FCGBPQ9Y6R7 5405 aaPredicted RBP2.42□□□□□ -2.02
LINC00534-203ENST00000523406 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
LINC00534-203ENST00000523406 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
LINC00534-203ENST00000523406 NEBP20929 6669 aa2.36□□□□□ -2.03
LINC00534-203ENST00000523406 KMT2DO14686 5537 aa2.33□□□□□ -2.04
LINC00534-203ENST00000523406 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
LINC00534-203ENST00000523406 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
LINC00534-203ENST00000523406 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
LINC00534-203ENST00000523406 MT1EP04732 61 aa2.29□□□□□ -2.04
LINC00534-203ENST00000523406 MT1LQ93083 61 aa2.26□□□□□ -2.05
LINC00534-203ENST00000523406 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
LINC00534-203ENST00000523406 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
LINC00534-203ENST00000523406 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
LINC00534-203ENST00000523406 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
LINC00534-203ENST00000523406 MT1GP13640 62 aa2.19□□□□□ -2.06
LINC00534-203ENST00000523406 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
LINC00534-203ENST00000523406 INE1O15225 51 aa2.16□□□□□ -2.06
LINC00534-203ENST00000523406 MT1MQ8N339 61 aa2.16□□□□□ -2.06
LINC00534-203ENST00000523406 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
LINC00534-203ENST00000523406 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
LINC00534-203ENST00000523406 SPRR2EP22531 72 aa2.11□□□□□ -2.07
LINC00534-203ENST00000523406 SPRR2BP35325 72 aa2.11□□□□□ -2.07
LINC00534-203ENST00000523406 SPRR2AP35326 72 aa2.11□□□□□ -2.07
LINC00534-203ENST00000523406 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
LINC00534-203ENST00000523406 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
LINC00534-203ENST00000523406 SPRR2DP22532 72 aa2.03□□□□□ -2.08
LINC00534-203ENST00000523406 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
LINC00534-203ENST00000523406 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
LINC00534-203ENST00000523406 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
LINC00534-203ENST00000523406 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
LINC00534-203ENST00000523406 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
LINC00534-203ENST00000523406 MT1AP04731 61 aa1.93□□□□□ -2.1
LINC00534-203ENST00000523406 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
LINC00534-203ENST00000523406 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
LINC00534-203ENST00000523406 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
LINC00534-203ENST00000523406 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
LINC00534-203ENST00000523406 MT4P47944 62 aa1.76□□□□□ -2.13
LINC00534-203ENST00000523406 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
LINC00534-203ENST00000523406 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
LINC00534-203ENST00000523406 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
LINC00534-203ENST00000523406 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
LINC00534-203ENST00000523406 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
LINC00534-203ENST00000523406 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
LINC00534-203ENST00000523406 PRM1P04553 51 aa1.52□□□□□ -2.17
LINC00534-203ENST00000523406 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
LINC00534-203ENST00000523406 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
LINC00534-203ENST00000523406 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 478.6 ms