RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
PCDHGB1-201ENST00000523390 SPRR2DP22532 72 aa4.38□□□□□ -1.71
PCDHGB1-201ENST00000523390 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
PCDHGB1-201ENST00000523390 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
PCDHGB1-201ENST00000523390 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
PCDHGB1-201ENST00000523390 MT1MQ8N339 61 aa4.24□□□□□ -1.73
PCDHGB1-201ENST00000523390 KMT2DO14686 5537 aa4.23□□□□□ -1.73
PCDHGB1-201ENST00000523390 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
PCDHGB1-201ENST00000523390 USH2AO75445 5202 aa4.2□□□□□ -1.74
PCDHGB1-201ENST00000523390 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
PCDHGB1-201ENST00000523390 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
PCDHGB1-201ENST00000523390 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
PCDHGB1-201ENST00000523390 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
PCDHGB1-201ENST00000523390 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
PCDHGB1-201ENST00000523390 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
PCDHGB1-201ENST00000523390 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
PCDHGB1-201ENST00000523390 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
PCDHGB1-201ENST00000523390 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
PCDHGB1-201ENST00000523390 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
PCDHGB1-201ENST00000523390 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
PCDHGB1-201ENST00000523390 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
PCDHGB1-201ENST00000523390 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
PCDHGB1-201ENST00000523390 MT4P47944 62 aa3.94□□□□□ -1.78
PCDHGB1-201ENST00000523390 MT3P25713 68 aa3.87□□□□□ -1.79
PCDHGB1-201ENST00000523390 MT1AP04731 61 aa3.85□□□□□ -1.79
PCDHGB1-201ENST00000523390 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
PCDHGB1-201ENST00000523390 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
PCDHGB1-201ENST00000523390 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
PCDHGB1-201ENST00000523390 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
PCDHGB1-201ENST00000523390 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
PCDHGB1-201ENST00000523390 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
PCDHGB1-201ENST00000523390 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
PCDHGB1-201ENST00000523390 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
PCDHGB1-201ENST00000523390 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
PCDHGB1-201ENST00000523390 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
PCDHGB1-201ENST00000523390 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
PCDHGB1-201ENST00000523390 PRM1P04553 51 aa3.64□□□□□ -1.83
PCDHGB1-201ENST00000523390 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
PCDHGB1-201ENST00000523390 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
PCDHGB1-201ENST00000523390 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
PCDHGB1-201ENST00000523390 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
PCDHGB1-201ENST00000523390 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
PCDHGB1-201ENST00000523390 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
PCDHGB1-201ENST00000523390 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
PCDHGB1-201ENST00000523390 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
PCDHGB1-201ENST00000523390 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
PCDHGB1-201ENST00000523390 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
PCDHGB1-201ENST00000523390 NEBP20929 6669 aa3.36□□□□□ -1.87
PCDHGB1-201ENST00000523390 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
PCDHGB1-201ENST00000523390 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
PCDHGB1-201ENST00000523390 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
PCDHGB1-201ENST00000523390 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PCDHGB1-201ENST00000523390 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
PCDHGB1-201ENST00000523390 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PCDHGB1-201ENST00000523390 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
PCDHGB1-201ENST00000523390 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
PCDHGB1-201ENST00000523390 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
PCDHGB1-201ENST00000523390 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
PCDHGB1-201ENST00000523390 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
PCDHGB1-201ENST00000523390 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
PCDHGB1-201ENST00000523390 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
PCDHGB1-201ENST00000523390 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
PCDHGB1-201ENST00000523390 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
PCDHGB1-201ENST00000523390 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
PCDHGB1-201ENST00000523390 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
PCDHGB1-201ENST00000523390 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
PCDHGB1-201ENST00000523390 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
PCDHGB1-201ENST00000523390 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
PCDHGB1-201ENST00000523390 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PCDHGB1-201ENST00000523390 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
PCDHGB1-201ENST00000523390 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
PCDHGB1-201ENST00000523390 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
PCDHGB1-201ENST00000523390 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
PCDHGB1-201ENST00000523390 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
PCDHGB1-201ENST00000523390 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
PCDHGB1-201ENST00000523390 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
PCDHGB1-201ENST00000523390 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 105 ms