RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 MT1EP04732 61 aa2.96□□□□□ -1.94
CSMD1-212ENST00000523387 USH2AO75445 5202 aa2.93□□□□□ -1.94
CSMD1-212ENST00000523387 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
CSMD1-212ENST00000523387 LCE3BQ5TA77 95 aa2.89□□□□□ -1.95
CSMD1-212ENST00000523387 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
CSMD1-212ENST00000523387 FSIP2Q5CZC0 6907 aa2.88□□□□□ -1.95
CSMD1-212ENST00000523387 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
CSMD1-212ENST00000523387 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
CSMD1-212ENST00000523387 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
CSMD1-212ENST00000523387 MT1MQ8N339 61 aa2.78□□□□□ -1.96
CSMD1-212ENST00000523387 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
CSMD1-212ENST00000523387 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
CSMD1-212ENST00000523387 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
CSMD1-212ENST00000523387 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
CSMD1-212ENST00000523387 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
CSMD1-212ENST00000523387 PRM1P04553 51 aa2.68□□□□□ -1.98
CSMD1-212ENST00000523387 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
CSMD1-212ENST00000523387 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
CSMD1-212ENST00000523387 KRTAP9-2Q9BYQ4 174 aa2.65□□□□□ -1.98
CSMD1-212ENST00000523387 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
CSMD1-212ENST00000523387 KRTAP9-7A8MTY7 169 aa2.59□□□□□ -2
CSMD1-212ENST00000523387 SSPOA2VEC9 5147 aa2.57□□□□□ -2
CSMD1-212ENST00000523387 MT1AP04731 61 aa2.57□□□□□ -2
CSMD1-212ENST00000523387 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
CSMD1-212ENST00000523387 LCE4AQ5TA78 99 aa2.57□□□□□ -2
CSMD1-212ENST00000523387 LCE5AQ5TCM9 118 aa2.54□□□□□ -2
CSMD1-212ENST00000523387 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
CSMD1-212ENST00000523387 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
CSMD1-212ENST00000523387 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
CSMD1-212ENST00000523387 SPRR2EP22531 72 aa2.47□□□□□ -2.01
CSMD1-212ENST00000523387 SPRR2BP35325 72 aa2.47□□□□□ -2.01
CSMD1-212ENST00000523387 SPRR2AP35326 72 aa2.47□□□□□ -2.01
CSMD1-212ENST00000523387 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
CSMD1-212ENST00000523387 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
CSMD1-212ENST00000523387 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
CSMD1-212ENST00000523387 MT3P25713 68 aa2.39□□□□□ -2.03
CSMD1-212ENST00000523387 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
CSMD1-212ENST00000523387 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.37□□□□□ -2.03
CSMD1-212ENST00000523387 SPRR2DP22532 72 aa2.35□□□□□ -2.03
CSMD1-212ENST00000523387 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
CSMD1-212ENST00000523387 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
CSMD1-212ENST00000523387 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
CSMD1-212ENST00000523387 LCE1AQ5T7P2 110 aa2.31□□□□□ -2.04
CSMD1-212ENST00000523387 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
CSMD1-212ENST00000523387 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
CSMD1-212ENST00000523387 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
CSMD1-212ENST00000523387 MT4P47944 62 aa2.14□□□□□ -2.07
CSMD1-212ENST00000523387 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
CSMD1-212ENST00000523387 LCE1DQ5T752 114 aa2.11□□□□□ -2.07
CSMD1-212ENST00000523387 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
CSMD1-212ENST00000523387 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
CSMD1-212ENST00000523387 NEBP20929 6669 aa2.08□□□□□ -2.08
CSMD1-212ENST00000523387 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
CSMD1-212ENST00000523387 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CSMD1-212ENST00000523387 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
CSMD1-212ENST00000523387 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
CSMD1-212ENST00000523387 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
CSMD1-212ENST00000523387 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
CSMD1-212ENST00000523387 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
CSMD1-212ENST00000523387 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
CSMD1-212ENST00000523387 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
CSMD1-212ENST00000523387 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
CSMD1-212ENST00000523387 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
CSMD1-212ENST00000523387 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
CSMD1-212ENST00000523387 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
CSMD1-212ENST00000523387 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
CSMD1-212ENST00000523387 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
CSMD1-212ENST00000523387 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
CSMD1-212ENST00000523387 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CSMD1-212ENST00000523387 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
CSMD1-212ENST00000523387 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
CSMD1-212ENST00000523387 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
CSMD1-212ENST00000523387 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CSMD1-212ENST00000523387 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CSMD1-212ENST00000523387 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
CSMD1-212ENST00000523387 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
CSMD1-212ENST00000523387 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
CSMD1-212ENST00000523387 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 61 ms