RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, human

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-222	ENST00000522476	KRTAP10-12	P60413	245 aa		5.26	□□□□□ -1.57
NDRG1-222	ENST00000522476	LCE3A	Q5TA76	89 aa		5.26	□□□□□ -1.57
NDRG1-222	ENST00000522476	KRTAP8-1	Q8IUC2	63 aa		5.25	□□□□□ -1.57
NDRG1-222	ENST00000522476	KRTAP10-7	P60409	375 aa	Predicted RBP	5.14	□□□□□ -1.59
NDRG1-222	ENST00000522476	LUZP6	Q538Z0	58 aa		5.14	□□□□□ -1.59
NDRG1-222	ENST00000522476	KRTAP12-3	P60328	96 aa		5.1	□□□□□ -1.59
NDRG1-222	ENST00000522476	SPRR2E	P22531	72 aa		5.07	□□□□□ -1.6
NDRG1-222	ENST00000522476	SPRR2B	P35325	72 aa		5.07	□□□□□ -1.6
NDRG1-222	ENST00000522476	SPRR2A	P35326	72 aa		5.07	□□□□□ -1.6
NDRG1-222	ENST00000522476	SPRR5	A0A1B0GTR4	108 aa		5.06	□□□□□ -1.6
NDRG1-222	ENST00000522476	NDUFAF8	A1L188	74 aa		5.05	□□□□□ -1.6
NDRG1-222	ENST00000522476	KRTAP19-4	Q3LI73	84 aa		4.97	□□□□□ -1.61
NDRG1-222	ENST00000522476	DST	Q03001	7570 aa	Known RBP	4.95	□□□□□ -1.62
NDRG1-222	ENST00000522476	SPRR2F	Q96RM1	72 aa		4.92	□□□□□ -1.62
NDRG1-222	ENST00000522476	SPRR2D	P22532	72 aa		4.91	□□□□□ -1.62
NDRG1-222	ENST00000522476	KRTAP19-5	Q3LI72	72 aa		4.91	□□□□□ -1.62
NDRG1-222	ENST00000522476	LCE1A	Q5T7P2	110 aa		4.88	□□□□□ -1.63
NDRG1-222	ENST00000522476	LCE3B	Q5TA77	95 aa		4.86	□□□□□ -1.63
NDRG1-222	ENST00000522476	KRTAP4-8	A0A0G2JLE6	195 aa		4.83	□□□□□ -1.64
NDRG1-222	ENST00000522476	KRTAP4-8	Q9BYQ9	185 aa		4.83	□□□□□ -1.64
NDRG1-222	ENST00000522476	KRTAP4-9	Q9BYQ8	210 aa		4.8	□□□□□ -1.64
NDRG1-222	ENST00000522476	AHNAK2	Q8IVF2	5795 aa		4.79	□□□□□ -1.64
NDRG1-222	ENST00000522476	KRTAP19-7	Q3SYF9	63 aa		4.78	□□□□□ -1.64
NDRG1-222	ENST00000522476	LCE3C	Q5T5A8	94 aa		4.78	□□□□□ -1.64
NDRG1-222	ENST00000522476	HMCN1	Q96RW7	5635 aa		4.74	□□□□□ -1.65
NDRG1-222	ENST00000522476	MT1E	P04732	61 aa		4.72	□□□□□ -1.65
NDRG1-222	ENST00000522476	KRTAP5-10	Q6L8G5	202 aa		4.7	□□□□□ -1.66
NDRG1-222	ENST00000522476	MT1L	Q93083	61 aa		4.66	□□□□□ -1.66
NDRG1-222	ENST00000522476	KRTAP5-7	Q6L8G8	165 aa		4.64	□□□□□ -1.67
NDRG1-222	ENST00000522476	LCE1D	Q5T752	114 aa		4.55	□□□□□ -1.68
NDRG1-222	ENST00000522476	MT1G	P13640	62 aa		4.53	□□□□□ -1.68
NDRG1-222	ENST00000522476	KRTAP19-3	Q7Z4W3	81 aa		4.52	□□□□□ -1.69
NDRG1-222	ENST00000522476	KRTAP9-9	Q9BYP9	154 aa		4.45	□□□□□ -1.7
NDRG1-222	ENST00000522476	KRTAP9-4	Q9BYQ2	154 aa		4.45	□□□□□ -1.7
NDRG1-222	ENST00000522476	KRTAP4-12	Q9BQ66	201 aa		4.44	□□□□□ -1.7
NDRG1-222	ENST00000522476	MT1M	Q8N339	61 aa		4.43	□□□□□ -1.7
NDRG1-222	ENST00000522476	KRTAP4-7	Q9BYR0	210 aa		4.42	□□□□□ -1.7
NDRG1-222	ENST00000522476	KRTAP9-6	A8MVA2	160 aa		4.4	□□□□□ -1.71
NDRG1-222	ENST00000522476	MT4	P47944	62 aa		4.39	□□□□□ -1.71
NDRG1-222	ENST00000522476	LCE5A	Q5TCM9	118 aa		4.38	□□□□□ -1.71
NDRG1-222	ENST00000522476	KRTAP5-3	Q6L8H2	238 aa		4.38	□□□□□ -1.71
NDRG1-222	ENST00000522476	INE1	O15225	51 aa		4.33	□□□□□ -1.72
NDRG1-222	ENST00000522476	AHNAK	Q09666	5890 aa	Known RBP	4.27	□□□□□ -1.73
NDRG1-222	ENST00000522476	LCE4A	Q5TA78	99 aa		4.27	□□□□□ -1.73
NDRG1-222	ENST00000522476	KRTAP4-3	Q9BYR4	195 aa		4.23	□□□□□ -1.73
NDRG1-222	ENST00000522476	KRTAP4-2	Q9BYR5	136 aa		4.14	□□□□□ -1.75
NDRG1-222	ENST00000522476	MUC5AC	P98088	5654 aa		4.11	□□□□□ -1.75
NDRG1-222	ENST00000522476	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.06	□□□□□ -1.76
NDRG1-222	ENST00000522476	KRTAP5-4	Q6L8H1	288 aa		4.02	□□□□□ -1.77
NDRG1-222	ENST00000522476	MT1A	P04731	61 aa		4.01	□□□□□ -1.77
NDRG1-222	ENST00000522476	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.95	□□□□□ -1.78
NDRG1-222	ENST00000522476	KRTAP4-11	Q9BYQ6	195 aa		3.95	□□□□□ -1.78
NDRG1-222	ENST00000522476	KRTAP6-1	Q3LI64	71 aa		3.88	□□□□□ -1.79
NDRG1-222	ENST00000522476	KRTAP20-2	Q3LI61	65 aa		3.87	□□□□□ -1.79
NDRG1-222	ENST00000522476	KRTAP5-8	O75690	187 aa		3.76	□□□□□ -1.81
NDRG1-222	ENST00000522476	KRTAP12-4	P60329	112 aa		3.71	□□□□□ -1.82
NDRG1-222	ENST00000522476	MT3	P25713	68 aa		3.65	□□□□□ -1.82
NDRG1-222	ENST00000522476	LCE3D	Q9BYE3	92 aa		3.65	□□□□□ -1.82
NDRG1-222	ENST00000522476	SYNE1	Q8NF91	8797 aa	Known RBP	3.62	□□□□□ -1.83
NDRG1-222	ENST00000522476	LCE3E	Q5T5B0	92 aa		3.6	□□□□□ -1.83
NDRG1-222	ENST00000522476	KRTAP6-2	Q3LI66	62 aa		3.54	□□□□□ -1.84
NDRG1-222	ENST00000522476	OBSCN	Q5VST9	7968 aa		3.53	□□□□□ -1.84
NDRG1-222	ENST00000522476	KRTAP5-2	Q701N4	177 aa		3.51	□□□□□ -1.85
NDRG1-222	ENST00000522476	KRTAP5-1	Q6L8H4	278 aa		3.2	□□□□□ -1.9
NDRG1-222	ENST00000522476	PRM1	P04553	51 aa		3.18	□□□□□ -1.9
NDRG1-222	ENST00000522476	LCE1E	Q5T753	118 aa		3.12	□□□□□ -1.91
NDRG1-222	ENST00000522476	LCE1F	Q5T754	118 aa		2.97	□□□□□ -1.93
NDRG1-222	ENST00000522476	LCE1C	Q5T751	118 aa		2.89	□□□□□ -1.95
NDRG1-222	ENST00000522476	LCE1B	Q5T7P3	118 aa		2.89	□□□□□ -1.95
NDRG1-222	ENST00000522476	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.87	□□□□□ -1.95
NDRG1-222	ENST00000522476	PHGR1	C9JFL3	82 aa		2.79	□□□□□ -1.96
NDRG1-222	ENST00000522476	KRTAP5-11	Q6L8G4	156 aa		2.65	□□□□□ -1.98
NDRG1-222	ENST00000522476	KRTAP21-2	Q3LI59	83 aa		2.54	□□□□□ -2
NDRG1-222	ENST00000522476	KRTAP4-4	Q9BYR3	166 aa		2.36	□□□□□ -2.03
NDRG1-222	ENST00000522476	MUC19	Q7Z5P9	8384 aa		2.23	□□□□□ -2.05
NDRG1-222	ENST00000522476	KRTAP21-1	Q3LI58	79 aa		2.11	□□□□□ -2.07
NDRG1-222	ENST00000522476	MUC16	Q8WXI7	14507 aa		1.49	□□□□□ -2.17

Retrieved 77 of 20,778 RNA–protein pairs in 31.3 ms