RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
SDC2-204ENST00000519914 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
SDC2-204ENST00000519914 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
SDC2-204ENST00000519914 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
SDC2-204ENST00000519914 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
SDC2-204ENST00000519914 HMCN2Q8NDA2 5059 aa2.36□□□□□ -2.03
SDC2-204ENST00000519914 INE1O15225 51 aa2.34□□□□□ -2.04
SDC2-204ENST00000519914 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
SDC2-204ENST00000519914 CRCT1Q9UGL9 99 aa2.31□□□□□ -2.04
SDC2-204ENST00000519914 R4GN34 69 aa2.31□□□□□ -2.04
SDC2-204ENST00000519914 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
SDC2-204ENST00000519914 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SDC2-204ENST00000519914 SPRR2GQ9BYE4 73 aa2.19□□□□□ -2.06
SDC2-204ENST00000519914 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
SDC2-204ENST00000519914 NEBP20929 6669 aa2.17□□□□□ -2.06
SDC2-204ENST00000519914 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
SDC2-204ENST00000519914 TNP1P09430 55 aa2.15□□□□□ -2.07
SDC2-204ENST00000519914 MT1HP80294 61 aa2.15□□□□□ -2.07
SDC2-204ENST00000519914 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
SDC2-204ENST00000519914 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
SDC2-204ENST00000519914 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
SDC2-204ENST00000519914 MT2AP02795 61 aa2.11□□□□□ -2.07
SDC2-204ENST00000519914 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
SDC2-204ENST00000519914 MT1FP04733 61 aa2.1□□□□□ -2.07
SDC2-204ENST00000519914 M0R2T5 61 aa2.06□□□□□ -2.08
SDC2-204ENST00000519914 MT1BP07438 61 aa2.06□□□□□ -2.08
SDC2-204ENST00000519914 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
SDC2-204ENST00000519914 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
SDC2-204ENST00000519914 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
SDC2-204ENST00000519914 MT1XP80297 61 aa2.03□□□□□ -2.08
SDC2-204ENST00000519914 KRTAP8-1Q8IUC2 63 aa2.03□□□□□ -2.08
SDC2-204ENST00000519914 USH2AO75445 5202 aa1.97□□□□□ -2.09
SDC2-204ENST00000519914 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
SDC2-204ENST00000519914 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
SDC2-204ENST00000519914 KMT2DO14686 5537 aa1.95□□□□□ -2.1
SDC2-204ENST00000519914 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
SDC2-204ENST00000519914 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
SDC2-204ENST00000519914 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
SDC2-204ENST00000519914 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
SDC2-204ENST00000519914 KRTAP19-5Q3LI72 72 aa1.85□□□□□ -2.11
SDC2-204ENST00000519914 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
SDC2-204ENST00000519914 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
SDC2-204ENST00000519914 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
SDC2-204ENST00000519914 KRTAP19-6Q3LI70 58 aa1.8□□□□□ -2.12
SDC2-204ENST00000519914 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
SDC2-204ENST00000519914 MT1EP04732 61 aa1.77□□□□□ -2.13
SDC2-204ENST00000519914 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
SDC2-204ENST00000519914 MT1LQ93083 61 aa1.76□□□□□ -2.13
SDC2-204ENST00000519914 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
SDC2-204ENST00000519914 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
SDC2-204ENST00000519914 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
SDC2-204ENST00000519914 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
SDC2-204ENST00000519914 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SDC2-204ENST00000519914 MT1GP13640 62 aa1.66□□□□□ -2.14
SDC2-204ENST00000519914 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
SDC2-204ENST00000519914 DSTQ03001 7570 aaKnown RBP1.65□□□□□ -2.14
SDC2-204ENST00000519914 MT1MQ8N339 61 aa1.65□□□□□ -2.15
SDC2-204ENST00000519914 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
SDC2-204ENST00000519914 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
SDC2-204ENST00000519914 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
SDC2-204ENST00000519914 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
SDC2-204ENST00000519914 MT1AP04731 61 aa1.51□□□□□ -2.17
SDC2-204ENST00000519914 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
SDC2-204ENST00000519914 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
SDC2-204ENST00000519914 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
SDC2-204ENST00000519914 SPRR2EP22531 72 aa1.42□□□□□ -2.18
SDC2-204ENST00000519914 SPRR2BP35325 72 aa1.42□□□□□ -2.18
SDC2-204ENST00000519914 SPRR2AP35326 72 aa1.42□□□□□ -2.18
SDC2-204ENST00000519914 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
SDC2-204ENST00000519914 SPRR2DP22532 72 aa1.37□□□□□ -2.19
SDC2-204ENST00000519914 PRM1P04553 51 aa1.35□□□□□ -2.19
SDC2-204ENST00000519914 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
SDC2-204ENST00000519914 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
SDC2-204ENST00000519914 MT4P47944 62 aa1.19□□□□□ -2.22
SDC2-204ENST00000519914 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
SDC2-204ENST00000519914 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SDC2-204ENST00000519914 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 60.2 ms