RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 H3BS24 57 aa6.32□□□□□ -1.4
FAM49B-214ENST00000519540 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
FAM49B-214ENST00000519540 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
FAM49B-214ENST00000519540 MT1GP13640 62 aa6.28□□□□□ -1.4
FAM49B-214ENST00000519540 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
FAM49B-214ENST00000519540 MT1MQ8N339 61 aa6.23□□□□□ -1.41
FAM49B-214ENST00000519540 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
FAM49B-214ENST00000519540 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
FAM49B-214ENST00000519540 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
FAM49B-214ENST00000519540 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
FAM49B-214ENST00000519540 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
FAM49B-214ENST00000519540 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
FAM49B-214ENST00000519540 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
FAM49B-214ENST00000519540 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
FAM49B-214ENST00000519540 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
FAM49B-214ENST00000519540 A0A0A0MQY5 61 aa5.96□□□□□ -1.46
FAM49B-214ENST00000519540 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
FAM49B-214ENST00000519540 SPRR2EP22531 72 aa5.94□□□□□ -1.46
FAM49B-214ENST00000519540 SPRR2BP35325 72 aa5.94□□□□□ -1.46
FAM49B-214ENST00000519540 SPRR2AP35326 72 aa5.94□□□□□ -1.46
FAM49B-214ENST00000519540 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
FAM49B-214ENST00000519540 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
FAM49B-214ENST00000519540 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
FAM49B-214ENST00000519540 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
FAM49B-214ENST00000519540 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
FAM49B-214ENST00000519540 SPRR2DP22532 72 aa5.71□□□□□ -1.5
FAM49B-214ENST00000519540 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
FAM49B-214ENST00000519540 INE1O15225 51 aa5.54□□□□□ -1.52
FAM49B-214ENST00000519540 MT1AP04731 61 aa5.53□□□□□ -1.52
FAM49B-214ENST00000519540 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
FAM49B-214ENST00000519540 NEBP20929 6669 aa5.5□□□□□ -1.53
FAM49B-214ENST00000519540 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
FAM49B-214ENST00000519540 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
FAM49B-214ENST00000519540 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
FAM49B-214ENST00000519540 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
FAM49B-214ENST00000519540 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
FAM49B-214ENST00000519540 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
FAM49B-214ENST00000519540 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
FAM49B-214ENST00000519540 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
FAM49B-214ENST00000519540 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
FAM49B-214ENST00000519540 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
FAM49B-214ENST00000519540 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
FAM49B-214ENST00000519540 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
FAM49B-214ENST00000519540 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
FAM49B-214ENST00000519540 MT3P25713 68 aa5.01□□□□□ -1.61
FAM49B-214ENST00000519540 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
FAM49B-214ENST00000519540 MT4P47944 62 aa4.97□□□□□ -1.61
FAM49B-214ENST00000519540 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
FAM49B-214ENST00000519540 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
FAM49B-214ENST00000519540 LCE1DQ5T752 114 aa4.84□□□□□ -1.64
FAM49B-214ENST00000519540 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
FAM49B-214ENST00000519540 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
FAM49B-214ENST00000519540 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
FAM49B-214ENST00000519540 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
FAM49B-214ENST00000519540 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
FAM49B-214ENST00000519540 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
FAM49B-214ENST00000519540 PRM1P04553 51 aa4.38□□□□□ -1.71
FAM49B-214ENST00000519540 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
FAM49B-214ENST00000519540 AHNAK2Q8IVF2 5795 aa4.23□□□□□ -1.73
FAM49B-214ENST00000519540 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
FAM49B-214ENST00000519540 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
FAM49B-214ENST00000519540 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
FAM49B-214ENST00000519540 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
FAM49B-214ENST00000519540 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
FAM49B-214ENST00000519540 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
FAM49B-214ENST00000519540 LCE1CQ5T751 118 aa4□□□□□ -1.77
FAM49B-214ENST00000519540 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
FAM49B-214ENST00000519540 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.81
FAM49B-214ENST00000519540 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
FAM49B-214ENST00000519540 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
FAM49B-214ENST00000519540 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
FAM49B-214ENST00000519540 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
FAM49B-214ENST00000519540 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
FAM49B-214ENST00000519540 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
FAM49B-214ENST00000519540 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
FAM49B-214ENST00000519540 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
FAM49B-214ENST00000519540 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms