RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
LINC01339-203ENST00000519336 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
LINC01339-203ENST00000519336 LINC01554Q52M75 96 aa1.79□□□□□ -2.12
LINC01339-203ENST00000519336 PRR15LQ9BU68 103 aa1.79□□□□□ -2.12
LINC01339-203ENST00000519336 CRIPTQ9P021 101 aa1.77□□□□□ -2.13
LINC01339-203ENST00000519336 A0A1B0GU69 56 aa1.76□□□□□ -2.13
LINC01339-203ENST00000519336 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
LINC01339-203ENST00000519336 MT2AP02795 61 aa1.75□□□□□ -2.13
LINC01339-203ENST00000519336 LINC01558Q9Y6Z2 57 aa1.74□□□□□ -2.13
LINC01339-203ENST00000519336 MT1FP04733 61 aa1.73□□□□□ -2.13
LINC01339-203ENST00000519336 M0QZ58 72 aa1.72□□□□□ -2.13
LINC01339-203ENST00000519336 UQCR11O14957 56 aa1.7□□□□□ -2.14
LINC01339-203ENST00000519336 Q5VV11 94 aa1.7□□□□□ -2.14
LINC01339-203ENST00000519336 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
LINC01339-203ENST00000519336 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
LINC01339-203ENST00000519336 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
LINC01339-203ENST00000519336 A6NN06 94 aa1.67□□□□□ -2.14
LINC01339-203ENST00000519336 A0A0D9SG42 100 aa1.66□□□□□ -2.14
LINC01339-203ENST00000519336 MIR22HGQ0VDD5 57 aa1.66□□□□□ -2.14
LINC01339-203ENST00000519336 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
LINC01339-203ENST00000519336 SPATA8Q6RVD6 105 aa1.66□□□□□ -2.14
LINC01339-203ENST00000519336 MT1BP07438 61 aa1.62□□□□□ -2.15
LINC01339-203ENST00000519336 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
LINC01339-203ENST00000519336 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
LINC01339-203ENST00000519336 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
LINC01339-203ENST00000519336 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
LINC01339-203ENST00000519336 BRK1Q8WUW1 75 aa1.59□□□□□ -2.15
LINC01339-203ENST00000519336 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
LINC01339-203ENST00000519336 USH2AO75445 5202 aa1.56□□□□□ -2.16
LINC01339-203ENST00000519336 MT1XP80297 61 aa1.56□□□□□ -2.16
LINC01339-203ENST00000519336 TNP1P09430 55 aa1.54□□□□□ -2.16
LINC01339-203ENST00000519336 ROMO1P60602 79 aa1.53□□□□□ -2.16
LINC01339-203ENST00000519336 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
LINC01339-203ENST00000519336 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
LINC01339-203ENST00000519336 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
LINC01339-203ENST00000519336 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
LINC01339-203ENST00000519336 INE1O15225 51 aa1.47□□□□□ -2.17
LINC01339-203ENST00000519336 KRTAP8-1Q8IUC2 63 aa1.47□□□□□ -2.17
LINC01339-203ENST00000519336 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
LINC01339-203ENST00000519336 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
LINC01339-203ENST00000519336 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
LINC01339-203ENST00000519336 KMT2DO14686 5537 aa1.38□□□□□ -2.19
LINC01339-203ENST00000519336 MT1EP04732 61 aa1.38□□□□□ -2.19
LINC01339-203ENST00000519336 SPRR2EP22531 72 aa1.38□□□□□ -2.19
LINC01339-203ENST00000519336 SPRR2BP35325 72 aa1.38□□□□□ -2.19
LINC01339-203ENST00000519336 SPRR2AP35326 72 aa1.38□□□□□ -2.19
LINC01339-203ENST00000519336 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
LINC01339-203ENST00000519336 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
LINC01339-203ENST00000519336 MT1GP13640 62 aa1.34□□□□□ -2.19
LINC01339-203ENST00000519336 SPRR2DP22532 72 aa1.34□□□□□ -2.19
LINC01339-203ENST00000519336 MT1LQ93083 61 aa1.34□□□□□ -2.19
LINC01339-203ENST00000519336 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.2
LINC01339-203ENST00000519336 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
LINC01339-203ENST00000519336 MT1MQ8N339 61 aa1.3□□□□□ -2.2
LINC01339-203ENST00000519336 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
LINC01339-203ENST00000519336 KRTAP2-3P0C7H8 128 aa1.28□□□□□ -2.2
LINC01339-203ENST00000519336 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
LINC01339-203ENST00000519336 KRTAP2-4Q9BYR9 128 aa1.28□□□□□ -2.2
LINC01339-203ENST00000519336 NEBP20929 6669 aa1.25□□□□□ -2.21
LINC01339-203ENST00000519336 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
LINC01339-203ENST00000519336 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
LINC01339-203ENST00000519336 MT1AP04731 61 aa1.15□□□□□ -2.23
LINC01339-203ENST00000519336 MT4P47944 62 aa1.14□□□□□ -2.23
LINC01339-203ENST00000519336 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
LINC01339-203ENST00000519336 KRTAP20-2Q3LI61 65 aa1.09□□□□□ -2.23
LINC01339-203ENST00000519336 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
LINC01339-203ENST00000519336 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
LINC01339-203ENST00000519336 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
LINC01339-203ENST00000519336 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
LINC01339-203ENST00000519336 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
LINC01339-203ENST00000519336 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
LINC01339-203ENST00000519336 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
LINC01339-203ENST00000519336 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
LINC01339-203ENST00000519336 PRM1P04553 51 aa0.78□□□□□ -2.28
LINC01339-203ENST00000519336 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
LINC01339-203ENST00000519336 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
LINC01339-203ENST00000519336 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 65.9 ms