RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 LCE3BQ5TA77 95 aa2.71□□□□□ -1.98
PCM1-212ENST00000519253 KRTAP19-3Q7Z4W3 81 aa2.69□□□□□ -1.98
PCM1-212ENST00000519253 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
PCM1-212ENST00000519253 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
PCM1-212ENST00000519253 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
PCM1-212ENST00000519253 MT1MQ8N339 61 aa2.65□□□□□ -1.99
PCM1-212ENST00000519253 LOC100996750A0A140TA64 210 aa2.61□□□□□ -1.99
PCM1-212ENST00000519253 USH2AO75445 5202 aa2.6□□□□□ -1.99
PCM1-212ENST00000519253 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
PCM1-212ENST00000519253 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -2
PCM1-212ENST00000519253 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
PCM1-212ENST00000519253 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
PCM1-212ENST00000519253 PRM1P04553 51 aa2.51□□□□□ -2.01
PCM1-212ENST00000519253 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
PCM1-212ENST00000519253 MT1AP04731 61 aa2.49□□□□□ -2.01
PCM1-212ENST00000519253 KMT2DO14686 5537 aa2.46□□□□□ -2.01
PCM1-212ENST00000519253 SPRR2EP22531 72 aa2.45□□□□□ -2.02
PCM1-212ENST00000519253 SPRR2BP35325 72 aa2.45□□□□□ -2.02
PCM1-212ENST00000519253 SPRR2AP35326 72 aa2.45□□□□□ -2.02
PCM1-212ENST00000519253 LCE2DQ5TA82 110 aaPredicted RBP2.44□□□□□ -2.02
PCM1-212ENST00000519253 KRTAP4-9Q9BYQ8 210 aa2.43□□□□□ -2.02
PCM1-212ENST00000519253 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
PCM1-212ENST00000519253 MT3P25713 68 aa2.4□□□□□ -2.03
PCM1-212ENST00000519253 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
PCM1-212ENST00000519253 SPRR2DP22532 72 aa2.36□□□□□ -2.03
PCM1-212ENST00000519253 KRTAP9-2Q9BYQ4 174 aa2.34□□□□□ -2.03
PCM1-212ENST00000519253 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
PCM1-212ENST00000519253 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
PCM1-212ENST00000519253 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
PCM1-212ENST00000519253 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
PCM1-212ENST00000519253 KRTAP9-4Q9BYQ2 154 aa2.26□□□□□ -2.05
PCM1-212ENST00000519253 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
PCM1-212ENST00000519253 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
PCM1-212ENST00000519253 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
PCM1-212ENST00000519253 KRTAP5-5Q701N2 237 aaPredicted RBP2.13□□□□□ -2.07
PCM1-212ENST00000519253 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
PCM1-212ENST00000519253 KRTAP9-6A0A140TA67 174 aa2.1□□□□□ -2.07
PCM1-212ENST00000519253 MT4P47944 62 aa2.06□□□□□ -2.08
PCM1-212ENST00000519253 LCE1DQ5T752 114 aa2.06□□□□□ -2.08
PCM1-212ENST00000519253 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
PCM1-212ENST00000519253 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
PCM1-212ENST00000519253 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
PCM1-212ENST00000519253 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.09
PCM1-212ENST00000519253 LCE4AQ5TA78 99 aa1.95□□□□□ -2.1
PCM1-212ENST00000519253 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PCM1-212ENST00000519253 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.11
PCM1-212ENST00000519253 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.86□□□□□ -2.11
PCM1-212ENST00000519253 KRTAP4-11Q9BYQ6 195 aa1.83□□□□□ -2.12
PCM1-212ENST00000519253 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
PCM1-212ENST00000519253 KRTAP4-6Q9BYQ5 205 aa1.8□□□□□ -2.12
PCM1-212ENST00000519253 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
PCM1-212ENST00000519253 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
PCM1-212ENST00000519253 NEBP20929 6669 aa1.73□□□□□ -2.13
PCM1-212ENST00000519253 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
PCM1-212ENST00000519253 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
PCM1-212ENST00000519253 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
PCM1-212ENST00000519253 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
PCM1-212ENST00000519253 KRTAP9-9Q9BYP9 154 aa1.56□□□□□ -2.16
PCM1-212ENST00000519253 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
PCM1-212ENST00000519253 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
PCM1-212ENST00000519253 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
PCM1-212ENST00000519253 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
PCM1-212ENST00000519253 KRTAP4-2Q9BYR5 136 aa1.46□□□□□ -2.17
PCM1-212ENST00000519253 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
PCM1-212ENST00000519253 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
PCM1-212ENST00000519253 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.18
PCM1-212ENST00000519253 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
PCM1-212ENST00000519253 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
PCM1-212ENST00000519253 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
PCM1-212ENST00000519253 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
PCM1-212ENST00000519253 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
PCM1-212ENST00000519253 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
PCM1-212ENST00000519253 KRTAP5-8O75690 187 aa1.3□□□□□ -2.2
PCM1-212ENST00000519253 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
PCM1-212ENST00000519253 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
PCM1-212ENST00000519253 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
PCM1-212ENST00000519253 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms