RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SMAD1-215ENST00000515385 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
SMAD1-215ENST00000515385 MT1EP04732 61 aa4.16□□□□□ -1.74
SMAD1-215ENST00000515385 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
SMAD1-215ENST00000515385 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SMAD1-215ENST00000515385 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
SMAD1-215ENST00000515385 USH2AO75445 5202 aa4.01□□□□□ -1.77
SMAD1-215ENST00000515385 KMT2DO14686 5537 aa4.01□□□□□ -1.77
SMAD1-215ENST00000515385 SSPOA2VEC9 5147 aa4□□□□□ -1.77
SMAD1-215ENST00000515385 MT1GP13640 62 aa3.93□□□□□ -1.78
SMAD1-215ENST00000515385 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
SMAD1-215ENST00000515385 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
SMAD1-215ENST00000515385 MT1AP04731 61 aa3.89□□□□□ -1.79
SMAD1-215ENST00000515385 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
SMAD1-215ENST00000515385 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
SMAD1-215ENST00000515385 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
SMAD1-215ENST00000515385 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
SMAD1-215ENST00000515385 MT1MQ8N339 61 aa3.85□□□□□ -1.79
SMAD1-215ENST00000515385 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
SMAD1-215ENST00000515385 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
SMAD1-215ENST00000515385 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SMAD1-215ENST00000515385 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
SMAD1-215ENST00000515385 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
SMAD1-215ENST00000515385 PRM1P04553 51 aa3.74□□□□□ -1.81
SMAD1-215ENST00000515385 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
SMAD1-215ENST00000515385 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
SMAD1-215ENST00000515385 NEBP20929 6669 aa3.68□□□□□ -1.82
SMAD1-215ENST00000515385 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
SMAD1-215ENST00000515385 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
SMAD1-215ENST00000515385 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
SMAD1-215ENST00000515385 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
SMAD1-215ENST00000515385 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SMAD1-215ENST00000515385 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
SMAD1-215ENST00000515385 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
SMAD1-215ENST00000515385 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
SMAD1-215ENST00000515385 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
SMAD1-215ENST00000515385 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SMAD1-215ENST00000515385 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
SMAD1-215ENST00000515385 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
SMAD1-215ENST00000515385 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
SMAD1-215ENST00000515385 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
SMAD1-215ENST00000515385 SPRR2EP22531 72 aa3.42□□□□□ -1.86
SMAD1-215ENST00000515385 SPRR2BP35325 72 aa3.42□□□□□ -1.86
SMAD1-215ENST00000515385 SPRR2AP35326 72 aa3.42□□□□□ -1.86
SMAD1-215ENST00000515385 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
SMAD1-215ENST00000515385 SPRR2DP22532 72 aa3.31□□□□□ -1.88
SMAD1-215ENST00000515385 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
SMAD1-215ENST00000515385 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
SMAD1-215ENST00000515385 MT3P25713 68 aa3.2□□□□□ -1.9
SMAD1-215ENST00000515385 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
SMAD1-215ENST00000515385 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
SMAD1-215ENST00000515385 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
SMAD1-215ENST00000515385 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
SMAD1-215ENST00000515385 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
SMAD1-215ENST00000515385 MT4P47944 62 aa2.89□□□□□ -1.95
SMAD1-215ENST00000515385 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
SMAD1-215ENST00000515385 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
SMAD1-215ENST00000515385 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
SMAD1-215ENST00000515385 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
SMAD1-215ENST00000515385 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
SMAD1-215ENST00000515385 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SMAD1-215ENST00000515385 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
SMAD1-215ENST00000515385 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
SMAD1-215ENST00000515385 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
SMAD1-215ENST00000515385 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
SMAD1-215ENST00000515385 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
SMAD1-215ENST00000515385 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SMAD1-215ENST00000515385 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
SMAD1-215ENST00000515385 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SMAD1-215ENST00000515385 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
SMAD1-215ENST00000515385 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SMAD1-215ENST00000515385 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
SMAD1-215ENST00000515385 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SMAD1-215ENST00000515385 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
SMAD1-215ENST00000515385 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SMAD1-215ENST00000515385 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SMAD1-215ENST00000515385 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 83.3 ms