RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
NPHP3-211ENST00000515289 MUC2Q02817 5179 aa2.69□□□□□ -1.98
NPHP3-211ENST00000515289 M0QZ58 72 aa2.67□□□□□ -1.98
NPHP3-211ENST00000515289 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
NPHP3-211ENST00000515289 A0A0D9SG42 100 aa2.66□□□□□ -1.98
NPHP3-211ENST00000515289 MT1HP80294 61 aa2.66□□□□□ -1.98
NPHP3-211ENST00000515289 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
NPHP3-211ENST00000515289 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
NPHP3-211ENST00000515289 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
NPHP3-211ENST00000515289 MT2AP02795 61 aa2.59□□□□□ -1.99
NPHP3-211ENST00000515289 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
NPHP3-211ENST00000515289 MT1FP04733 61 aa2.58□□□□□ -2
NPHP3-211ENST00000515289 M0R2T5 61 aa2.56□□□□□ -2
NPHP3-211ENST00000515289 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
NPHP3-211ENST00000515289 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
NPHP3-211ENST00000515289 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
NPHP3-211ENST00000515289 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
NPHP3-211ENST00000515289 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
NPHP3-211ENST00000515289 MT1BP07438 61 aa2.47□□□□□ -2.01
NPHP3-211ENST00000515289 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
NPHP3-211ENST00000515289 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
NPHP3-211ENST00000515289 MT1XP80297 61 aa2.4□□□□□ -2.03
NPHP3-211ENST00000515289 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
NPHP3-211ENST00000515289 TNP1P09430 55 aa2.36□□□□□ -2.03
NPHP3-211ENST00000515289 USH2AO75445 5202 aa2.32□□□□□ -2.04
NPHP3-211ENST00000515289 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
NPHP3-211ENST00000515289 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
NPHP3-211ENST00000515289 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
NPHP3-211ENST00000515289 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
NPHP3-211ENST00000515289 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
NPHP3-211ENST00000515289 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
NPHP3-211ENST00000515289 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
NPHP3-211ENST00000515289 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
NPHP3-211ENST00000515289 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
NPHP3-211ENST00000515289 KMT2DO14686 5537 aa2.11□□□□□ -2.07
NPHP3-211ENST00000515289 MT1EP04732 61 aa2.09□□□□□ -2.07
NPHP3-211ENST00000515289 MT1LQ93083 61 aa2.06□□□□□ -2.08
NPHP3-211ENST00000515289 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
NPHP3-211ENST00000515289 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
NPHP3-211ENST00000515289 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
NPHP3-211ENST00000515289 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
NPHP3-211ENST00000515289 MT1MQ8N339 61 aa1.96□□□□□ -2.1
NPHP3-211ENST00000515289 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
NPHP3-211ENST00000515289 MT1GP13640 62 aa1.95□□□□□ -2.1
NPHP3-211ENST00000515289 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.1
NPHP3-211ENST00000515289 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 SPRR2EP22531 72 aa1.85□□□□□ -2.11
NPHP3-211ENST00000515289 SPRR2BP35325 72 aa1.85□□□□□ -2.11
NPHP3-211ENST00000515289 SPRR2AP35326 72 aa1.85□□□□□ -2.11
NPHP3-211ENST00000515289 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
NPHP3-211ENST00000515289 SPRR2DP22532 72 aa1.77□□□□□ -2.13
NPHP3-211ENST00000515289 MT1AP04731 61 aa1.75□□□□□ -2.13
NPHP3-211ENST00000515289 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
NPHP3-211ENST00000515289 NEBP20929 6669 aa1.73□□□□□ -2.13
NPHP3-211ENST00000515289 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
NPHP3-211ENST00000515289 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
NPHP3-211ENST00000515289 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.15
NPHP3-211ENST00000515289 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
NPHP3-211ENST00000515289 MT4P47944 62 aa1.53□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
NPHP3-211ENST00000515289 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
NPHP3-211ENST00000515289 PRM1P04553 51 aa1.35□□□□□ -2.19
NPHP3-211ENST00000515289 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
NPHP3-211ENST00000515289 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
NPHP3-211ENST00000515289 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
NPHP3-211ENST00000515289 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
NPHP3-211ENST00000515289 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
NPHP3-211ENST00000515289 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
NPHP3-211ENST00000515289 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
NPHP3-211ENST00000515289 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms