RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
CDH6-205ENST00000514738 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CDH6-205ENST00000514738 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
CDH6-205ENST00000514738 MT1LQ93083 61 aa4.78□□□□□ -1.64
CDH6-205ENST00000514738 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
CDH6-205ENST00000514738 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
CDH6-205ENST00000514738 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
CDH6-205ENST00000514738 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
CDH6-205ENST00000514738 MT1HP80294 61 aa4.68□□□□□ -1.66
CDH6-205ENST00000514738 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
CDH6-205ENST00000514738 MT1AP04731 61 aa4.67□□□□□ -1.66
CDH6-205ENST00000514738 MT1EP04732 61 aa4.67□□□□□ -1.66
CDH6-205ENST00000514738 MT1GP13640 62 aa4.63□□□□□ -1.67
CDH6-205ENST00000514738 KRTAP4-5Q9BYR2 181 aa4.62□□□□□ -1.67
CDH6-205ENST00000514738 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
CDH6-205ENST00000514738 LCE2BO14633 110 aa4.59□□□□□ -1.67
CDH6-205ENST00000514738 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
CDH6-205ENST00000514738 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
CDH6-205ENST00000514738 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
CDH6-205ENST00000514738 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
CDH6-205ENST00000514738 KRTAP9-3Q9BYQ3 159 aa4.51□□□□□ -1.69
CDH6-205ENST00000514738 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.7
CDH6-205ENST00000514738 USH2AO75445 5202 aa4.26□□□□□ -1.73
CDH6-205ENST00000514738 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
CDH6-205ENST00000514738 MT1MQ8N339 61 aa4.19□□□□□ -1.74
CDH6-205ENST00000514738 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.74
CDH6-205ENST00000514738 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
CDH6-205ENST00000514738 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
CDH6-205ENST00000514738 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CDH6-205ENST00000514738 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
CDH6-205ENST00000514738 SPRR2AP35326 72 aa3.95□□□□□ -1.78
CDH6-205ENST00000514738 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
CDH6-205ENST00000514738 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CDH6-205ENST00000514738 SPRR2EP22531 72 aa3.87□□□□□ -1.79
CDH6-205ENST00000514738 MT3P25713 68 aa3.83□□□□□ -1.8
CDH6-205ENST00000514738 SPRR2BP35325 72 aa3.81□□□□□ -1.8
CDH6-205ENST00000514738 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
CDH6-205ENST00000514738 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
CDH6-205ENST00000514738 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
CDH6-205ENST00000514738 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
CDH6-205ENST00000514738 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
CDH6-205ENST00000514738 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
CDH6-205ENST00000514738 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
CDH6-205ENST00000514738 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
CDH6-205ENST00000514738 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
CDH6-205ENST00000514738 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
CDH6-205ENST00000514738 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
CDH6-205ENST00000514738 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
CDH6-205ENST00000514738 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
CDH6-205ENST00000514738 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
CDH6-205ENST00000514738 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
CDH6-205ENST00000514738 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
CDH6-205ENST00000514738 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
CDH6-205ENST00000514738 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
CDH6-205ENST00000514738 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
CDH6-205ENST00000514738 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
CDH6-205ENST00000514738 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
CDH6-205ENST00000514738 NEBP20929 6669 aa2.77□□□□□ -1.97
CDH6-205ENST00000514738 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
CDH6-205ENST00000514738 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
CDH6-205ENST00000514738 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -1.99
CDH6-205ENST00000514738 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
CDH6-205ENST00000514738 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CDH6-205ENST00000514738 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CDH6-205ENST00000514738 MT4P47944 62 aa2.3□□□□□ -2.04
CDH6-205ENST00000514738 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
CDH6-205ENST00000514738 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
CDH6-205ENST00000514738 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
CDH6-205ENST00000514738 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CDH6-205ENST00000514738 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
CDH6-205ENST00000514738 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
CDH6-205ENST00000514738 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CDH6-205ENST00000514738 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
CDH6-205ENST00000514738 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
CDH6-205ENST00000514738 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
CDH6-205ENST00000514738 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
CDH6-205ENST00000514738 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms