RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
SEC24D-214ENST00000514561 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
SEC24D-214ENST00000514561 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
SEC24D-214ENST00000514561 KRTAP9-8Q9BYQ0 159 aa1.85□□□□□ -2.11
SEC24D-214ENST00000514561 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
SEC24D-214ENST00000514561 USH2AO75445 5202 aa1.84□□□□□ -2.11
SEC24D-214ENST00000514561 NEBP20929 6669 aa1.83□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP10-7P60409 375 aaPredicted RBP1.83□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP4-11Q9BYQ6 195 aa1.83□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP8-1Q8IUC2 63 aa1.82□□□□□ -2.12
SEC24D-214ENST00000514561 MT1BP07438 61 aa1.82□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP19-8Q3LI54 63 aa1.81□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
SEC24D-214ENST00000514561 MT1XP80297 61 aa1.81□□□□□ -2.12
SEC24D-214ENST00000514561 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP4-2Q9BYR5 136 aa1.79□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP10-5P60370 271 aa1.79□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP4-7Q9BYR0 210 aa1.79□□□□□ -2.12
SEC24D-214ENST00000514561 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.13
SEC24D-214ENST00000514561 KMT2DO14686 5537 aa1.76□□□□□ -2.13
SEC24D-214ENST00000514561 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
SEC24D-214ENST00000514561 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
SEC24D-214ENST00000514561 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
SEC24D-214ENST00000514561 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
SEC24D-214ENST00000514561 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
SEC24D-214ENST00000514561 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
SEC24D-214ENST00000514561 SPRR2FQ96RM1 72 aa1.71□□□□□ -2.14
SEC24D-214ENST00000514561 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
SEC24D-214ENST00000514561 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
SEC24D-214ENST00000514561 KRTAP5-3Q6L8H2 238 aa1.69□□□□□ -2.14
SEC24D-214ENST00000514561 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
SEC24D-214ENST00000514561 KRTAP19-6Q3LI70 58 aa1.64□□□□□ -2.15
SEC24D-214ENST00000514561 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
SEC24D-214ENST00000514561 MT1GP13640 62 aa1.63□□□□□ -2.15
SEC24D-214ENST00000514561 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
SEC24D-214ENST00000514561 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
SEC24D-214ENST00000514561 MT1EP04732 61 aa1.59□□□□□ -2.16
SEC24D-214ENST00000514561 KRTAP4-3Q9BYR4 195 aa1.59□□□□□ -2.16
SEC24D-214ENST00000514561 MT1LQ93083 61 aa1.58□□□□□ -2.16
SEC24D-214ENST00000514561 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
SEC24D-214ENST00000514561 SPRR2EP22531 72 aa1.56□□□□□ -2.16
SEC24D-214ENST00000514561 SPRR2BP35325 72 aa1.56□□□□□ -2.16
SEC24D-214ENST00000514561 SPRR2AP35326 72 aa1.56□□□□□ -2.16
SEC24D-214ENST00000514561 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
SEC24D-214ENST00000514561 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
SEC24D-214ENST00000514561 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
SEC24D-214ENST00000514561 KRTAP5-9P26371 169 aa1.52□□□□□ -2.17
SEC24D-214ENST00000514561 MT1MQ8N339 61 aa1.51□□□□□ -2.17
SEC24D-214ENST00000514561 SPRR2DP22532 72 aa1.49□□□□□ -2.17
SEC24D-214ENST00000514561 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
SEC24D-214ENST00000514561 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
SEC24D-214ENST00000514561 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
SEC24D-214ENST00000514561 MT3P25713 68 aa1.42□□□□□ -2.18
SEC24D-214ENST00000514561 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
SEC24D-214ENST00000514561 MT1AP04731 61 aa1.38□□□□□ -2.19
SEC24D-214ENST00000514561 MT4P47944 62 aa1.38□□□□□ -2.19
SEC24D-214ENST00000514561 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
SEC24D-214ENST00000514561 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
SEC24D-214ENST00000514561 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
SEC24D-214ENST00000514561 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.2
SEC24D-214ENST00000514561 KRTAP5-4Q6L8H1 288 aa1.34□□□□□ -2.2
SEC24D-214ENST00000514561 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
SEC24D-214ENST00000514561 PRM1P04553 51 aa1.32□□□□□ -2.2
SEC24D-214ENST00000514561 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
SEC24D-214ENST00000514561 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
SEC24D-214ENST00000514561 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
SEC24D-214ENST00000514561 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
SEC24D-214ENST00000514561 LCE1CQ5T751 118 aa1.23□□□□□ -2.21
SEC24D-214ENST00000514561 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
SEC24D-214ENST00000514561 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
SEC24D-214ENST00000514561 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
SEC24D-214ENST00000514561 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
SEC24D-214ENST00000514561 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
SEC24D-214ENST00000514561 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
SEC24D-214ENST00000514561 PHGR1C9JFL3 82 aa0.9□□□□□ -2.26
SEC24D-214ENST00000514561 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.28
SEC24D-214ENST00000514561 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms