RNA–Protein interactions for RNA: ENST00000514170.5

CNGA1-207, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CNGA1, Length 2,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-207ENST00000514170 MT1FP04733 61 aa2.5□□□□□ -2.01
CNGA1-207ENST00000514170 MT2AP02795 61 aa2.47□□□□□ -2.01
CNGA1-207ENST00000514170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
CNGA1-207ENST00000514170 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
CNGA1-207ENST00000514170 TNP1P09430 55 aa2.43□□□□□ -2.02
CNGA1-207ENST00000514170 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
CNGA1-207ENST00000514170 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
CNGA1-207ENST00000514170 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
CNGA1-207ENST00000514170 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
CNGA1-207ENST00000514170 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
CNGA1-207ENST00000514170 MT1BP07438 61 aa2.26□□□□□ -2.05
CNGA1-207ENST00000514170 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
CNGA1-207ENST00000514170 LCE3AQ5TA76 89 aa2.23□□□□□ -2.05
CNGA1-207ENST00000514170 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
CNGA1-207ENST00000514170 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
CNGA1-207ENST00000514170 SPRR2GQ9BYE4 73 aa2.22□□□□□ -2.05
CNGA1-207ENST00000514170 KRTAP10-12P60413 245 aa2.18□□□□□ -2.06
CNGA1-207ENST00000514170 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
CNGA1-207ENST00000514170 MT1XP80297 61 aa2.17□□□□□ -2.06
CNGA1-207ENST00000514170 KRTAP10-5P60370 271 aa2.15□□□□□ -2.06
CNGA1-207ENST00000514170 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
CNGA1-207ENST00000514170 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
CNGA1-207ENST00000514170 KRTAP19-6Q3LI70 58 aa2.12□□□□□ -2.07
CNGA1-207ENST00000514170 SPRR2FQ96RM1 72 aa2.12□□□□□ -2.07
CNGA1-207ENST00000514170 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
CNGA1-207ENST00000514170 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.08
CNGA1-207ENST00000514170 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
CNGA1-207ENST00000514170 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
CNGA1-207ENST00000514170 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
CNGA1-207ENST00000514170 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
CNGA1-207ENST00000514170 KRTAP2-1Q9BYU5 128 aa2.05□□□□□ -2.08
CNGA1-207ENST00000514170 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
CNGA1-207ENST00000514170 NEBP20929 6669 aa2.01□□□□□ -2.09
CNGA1-207ENST00000514170 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
CNGA1-207ENST00000514170 SPRR2EP22531 72 aa2□□□□□ -2.09
CNGA1-207ENST00000514170 SPRR2BP35325 72 aa2□□□□□ -2.09
CNGA1-207ENST00000514170 SPRR2AP35326 72 aa2□□□□□ -2.09
CNGA1-207ENST00000514170 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
CNGA1-207ENST00000514170 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
CNGA1-207ENST00000514170 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
CNGA1-207ENST00000514170 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
CNGA1-207ENST00000514170 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
CNGA1-207ENST00000514170 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
CNGA1-207ENST00000514170 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
CNGA1-207ENST00000514170 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CNGA1-207ENST00000514170 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.1
CNGA1-207ENST00000514170 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.1
CNGA1-207ENST00000514170 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
CNGA1-207ENST00000514170 MT1EP04732 61 aa1.89□□□□□ -2.11
CNGA1-207ENST00000514170 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CNGA1-207ENST00000514170 KRTAP20-1Q3LI63 56 aa1.86□□□□□ -2.11
CNGA1-207ENST00000514170 MT1GP13640 62 aa1.84□□□□□ -2.12
CNGA1-207ENST00000514170 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
CNGA1-207ENST00000514170 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
CNGA1-207ENST00000514170 MT1LQ93083 61 aa1.83□□□□□ -2.12
CNGA1-207ENST00000514170 MT4P47944 62 aa1.81□□□□□ -2.12
CNGA1-207ENST00000514170 MT1MQ8N339 61 aa1.8□□□□□ -2.12
CNGA1-207ENST00000514170 LCE1EQ5T753 118 aa1.79□□□□□ -2.12
CNGA1-207ENST00000514170 PRM1P04553 51 aa1.72□□□□□ -2.13
CNGA1-207ENST00000514170 MT1AP04731 61 aa1.68□□□□□ -2.14
CNGA1-207ENST00000514170 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
CNGA1-207ENST00000514170 LCE3EQ5T5B0 92 aa1.62□□□□□ -2.15
CNGA1-207ENST00000514170 LCE1FQ5T754 118 aa1.62□□□□□ -2.15
CNGA1-207ENST00000514170 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
CNGA1-207ENST00000514170 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
CNGA1-207ENST00000514170 MT3P25713 68 aa1.58□□□□□ -2.16
CNGA1-207ENST00000514170 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
CNGA1-207ENST00000514170 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
CNGA1-207ENST00000514170 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
CNGA1-207ENST00000514170 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
CNGA1-207ENST00000514170 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
CNGA1-207ENST00000514170 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
CNGA1-207ENST00000514170 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
CNGA1-207ENST00000514170 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CNGA1-207ENST00000514170 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
CNGA1-207ENST00000514170 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
CNGA1-207ENST00000514170 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 222 ms