RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
TRAPPC11-209ENST00000512476 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
TRAPPC11-209ENST00000512476 MT1HP80294 61 aa2.2□□□□□ -2.06
TRAPPC11-209ENST00000512476 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC11-209ENST00000512476 M0R2T5 61 aa2.16□□□□□ -2.06
TRAPPC11-209ENST00000512476 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.07
TRAPPC11-209ENST00000512476 M0QZ58 72 aa2.14□□□□□ -2.07
TRAPPC11-209ENST00000512476 MT2AP02795 61 aa2.12□□□□□ -2.07
TRAPPC11-209ENST00000512476 MT1FP04733 61 aa2.1□□□□□ -2.07
TRAPPC11-209ENST00000512476 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
TRAPPC11-209ENST00000512476 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
TRAPPC11-209ENST00000512476 MT1BP07438 61 aa1.99□□□□□ -2.09
TRAPPC11-209ENST00000512476 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
TRAPPC11-209ENST00000512476 MT1XP80297 61 aa1.93□□□□□ -2.1
TRAPPC11-209ENST00000512476 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
TRAPPC11-209ENST00000512476 USH2AO75445 5202 aa1.9□□□□□ -2.1
TRAPPC11-209ENST00000512476 TNP1P09430 55 aa1.9□□□□□ -2.11
TRAPPC11-209ENST00000512476 KRTAP5-9P26371 169 aa1.89□□□□□ -2.11
TRAPPC11-209ENST00000512476 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TRAPPC11-209ENST00000512476 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC11-209ENST00000512476 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC11-209ENST00000512476 KRTAP19-6Q3LI70 58 aa1.86□□□□□ -2.11
TRAPPC11-209ENST00000512476 SSPOA2VEC9 5147 aa1.83□□□□□ -2.12
TRAPPC11-209ENST00000512476 LCE3AQ5TA76 89 aa1.83□□□□□ -2.12
TRAPPC11-209ENST00000512476 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
TRAPPC11-209ENST00000512476 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
TRAPPC11-209ENST00000512476 FSIP2Q5CZC0 6907 aa1.8□□□□□ -2.12
TRAPPC11-209ENST00000512476 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
TRAPPC11-209ENST00000512476 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
TRAPPC11-209ENST00000512476 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
TRAPPC11-209ENST00000512476 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
TRAPPC11-209ENST00000512476 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
TRAPPC11-209ENST00000512476 KMT2DO14686 5537 aa1.74□□□□□ -2.13
TRAPPC11-209ENST00000512476 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
TRAPPC11-209ENST00000512476 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
TRAPPC11-209ENST00000512476 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
TRAPPC11-209ENST00000512476 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
TRAPPC11-209ENST00000512476 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
TRAPPC11-209ENST00000512476 MT1EP04732 61 aa1.69□□□□□ -2.14
TRAPPC11-209ENST00000512476 NEBP20929 6669 aa1.68□□□□□ -2.14
TRAPPC11-209ENST00000512476 MACF1Q9UPN3 7388 aaKnown RBP1.67□□□□□ -2.14
TRAPPC11-209ENST00000512476 MT1LQ93083 61 aa1.66□□□□□ -2.14
TRAPPC11-209ENST00000512476 PRM1P04553 51 aa1.66□□□□□ -2.14
TRAPPC11-209ENST00000512476 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
TRAPPC11-209ENST00000512476 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
TRAPPC11-209ENST00000512476 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
TRAPPC11-209ENST00000512476 SYNE2Q8WXH0 6885 aaKnown RBP1.61□□□□□ -2.15
TRAPPC11-209ENST00000512476 MT1GP13640 62 aa1.61□□□□□ -2.15
TRAPPC11-209ENST00000512476 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
TRAPPC11-209ENST00000512476 MT1MQ8N339 61 aa1.59□□□□□ -2.15
TRAPPC11-209ENST00000512476 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
TRAPPC11-209ENST00000512476 KRTAP5-5Q701N2 237 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC11-209ENST00000512476 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
TRAPPC11-209ENST00000512476 SPRR2EP22531 72 aa1.56□□□□□ -2.16
TRAPPC11-209ENST00000512476 SPRR2BP35325 72 aa1.56□□□□□ -2.16
TRAPPC11-209ENST00000512476 SPRR2AP35326 72 aa1.56□□□□□ -2.16
TRAPPC11-209ENST00000512476 MDN1Q9NU22 5596 aa1.54□□□□□ -2.16
TRAPPC11-209ENST00000512476 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
TRAPPC11-209ENST00000512476 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
TRAPPC11-209ENST00000512476 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
TRAPPC11-209ENST00000512476 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
TRAPPC11-209ENST00000512476 SPRR2DP22532 72 aa1.5□□□□□ -2.17
TRAPPC11-209ENST00000512476 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-209ENST00000512476 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
TRAPPC11-209ENST00000512476 MT1AP04731 61 aa1.41□□□□□ -2.18
TRAPPC11-209ENST00000512476 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
TRAPPC11-209ENST00000512476 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
TRAPPC11-209ENST00000512476 MT4P47944 62 aa1.3□□□□□ -2.2
TRAPPC11-209ENST00000512476 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
TRAPPC11-209ENST00000512476 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
TRAPPC11-209ENST00000512476 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
TRAPPC11-209ENST00000512476 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
TRAPPC11-209ENST00000512476 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
TRAPPC11-209ENST00000512476 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
TRAPPC11-209ENST00000512476 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
TRAPPC11-209ENST00000512476 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
TRAPPC11-209ENST00000512476 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 115.5 ms