RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
PDCD6-209ENST00000512466 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
PDCD6-209ENST00000512466 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.82
PDCD6-209ENST00000512466 MT1GP13640 62 aa3.63□□□□□ -1.83
PDCD6-209ENST00000512466 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
PDCD6-209ENST00000512466 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
PDCD6-209ENST00000512466 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
PDCD6-209ENST00000512466 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
PDCD6-209ENST00000512466 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
PDCD6-209ENST00000512466 MT1LQ93083 61 aa3.56□□□□□ -1.84
PDCD6-209ENST00000512466 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
PDCD6-209ENST00000512466 MT1EP04732 61 aa3.53□□□□□ -1.84
PDCD6-209ENST00000512466 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
PDCD6-209ENST00000512466 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
PDCD6-209ENST00000512466 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
PDCD6-209ENST00000512466 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
PDCD6-209ENST00000512466 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
PDCD6-209ENST00000512466 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
PDCD6-209ENST00000512466 SPRR2EP22531 72 aa3.42□□□□□ -1.86
PDCD6-209ENST00000512466 SPRR2BP35325 72 aa3.42□□□□□ -1.86
PDCD6-209ENST00000512466 SPRR2AP35326 72 aa3.42□□□□□ -1.86
PDCD6-209ENST00000512466 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
PDCD6-209ENST00000512466 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
PDCD6-209ENST00000512466 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
PDCD6-209ENST00000512466 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
PDCD6-209ENST00000512466 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
PDCD6-209ENST00000512466 MT1MQ8N339 61 aa3.33□□□□□ -1.88
PDCD6-209ENST00000512466 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
PDCD6-209ENST00000512466 SPRR2DP22532 72 aa3.3□□□□□ -1.88
PDCD6-209ENST00000512466 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
PDCD6-209ENST00000512466 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
PDCD6-209ENST00000512466 PRM1P04553 51 aa3.2□□□□□ -1.9
PDCD6-209ENST00000512466 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
PDCD6-209ENST00000512466 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
PDCD6-209ENST00000512466 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
PDCD6-209ENST00000512466 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
PDCD6-209ENST00000512466 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
PDCD6-209ENST00000512466 NEBP20929 6669 aa3.09□□□□□ -1.92
PDCD6-209ENST00000512466 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
PDCD6-209ENST00000512466 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
PDCD6-209ENST00000512466 MT1AP04731 61 aa2.95□□□□□ -1.94
PDCD6-209ENST00000512466 MT4P47944 62 aa2.9□□□□□ -1.95
PDCD6-209ENST00000512466 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
PDCD6-209ENST00000512466 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
PDCD6-209ENST00000512466 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
PDCD6-209ENST00000512466 MT3P25713 68 aa2.8□□□□□ -1.96
PDCD6-209ENST00000512466 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
PDCD6-209ENST00000512466 KRTAP9-4Q9BYQ2 154 aa2.77□□□□□ -1.97
PDCD6-209ENST00000512466 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
PDCD6-209ENST00000512466 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
PDCD6-209ENST00000512466 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
PDCD6-209ENST00000512466 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
PDCD6-209ENST00000512466 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
PDCD6-209ENST00000512466 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
PDCD6-209ENST00000512466 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
PDCD6-209ENST00000512466 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
PDCD6-209ENST00000512466 LCE1FQ5T754 118 aa2.58□□□□□ -2
PDCD6-209ENST00000512466 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
PDCD6-209ENST00000512466 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
PDCD6-209ENST00000512466 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
PDCD6-209ENST00000512466 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
PDCD6-209ENST00000512466 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
PDCD6-209ENST00000512466 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
PDCD6-209ENST00000512466 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
PDCD6-209ENST00000512466 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
PDCD6-209ENST00000512466 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
PDCD6-209ENST00000512466 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
PDCD6-209ENST00000512466 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
PDCD6-209ENST00000512466 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
PDCD6-209ENST00000512466 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
PDCD6-209ENST00000512466 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
PDCD6-209ENST00000512466 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
PDCD6-209ENST00000512466 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
PDCD6-209ENST00000512466 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
PDCD6-209ENST00000512466 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
PDCD6-209ENST00000512466 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PDCD6-209ENST00000512466 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
PDCD6-209ENST00000512466 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms