RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 MT1MQ8N339 61 aa4.4□□□□□ -1.7
TRIO-218ENST00000512070 MUC2Q02817 5179 aa4.39□□□□□ -1.71
TRIO-218ENST00000512070 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
TRIO-218ENST00000512070 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
TRIO-218ENST00000512070 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
TRIO-218ENST00000512070 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
TRIO-218ENST00000512070 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
TRIO-218ENST00000512070 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
TRIO-218ENST00000512070 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
TRIO-218ENST00000512070 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
TRIO-218ENST00000512070 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
TRIO-218ENST00000512070 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
TRIO-218ENST00000512070 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
TRIO-218ENST00000512070 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
TRIO-218ENST00000512070 MT1AP04731 61 aa4.2□□□□□ -1.74
TRIO-218ENST00000512070 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
TRIO-218ENST00000512070 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
TRIO-218ENST00000512070 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
TRIO-218ENST00000512070 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
TRIO-218ENST00000512070 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
TRIO-218ENST00000512070 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
TRIO-218ENST00000512070 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
TRIO-218ENST00000512070 KRTAP9-6A0A140TA67 174 aa4.07□□□□□ -1.76
TRIO-218ENST00000512070 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
TRIO-218ENST00000512070 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
TRIO-218ENST00000512070 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
TRIO-218ENST00000512070 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
TRIO-218ENST00000512070 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
TRIO-218ENST00000512070 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
TRIO-218ENST00000512070 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
TRIO-218ENST00000512070 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
TRIO-218ENST00000512070 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
TRIO-218ENST00000512070 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
TRIO-218ENST00000512070 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
TRIO-218ENST00000512070 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
TRIO-218ENST00000512070 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
TRIO-218ENST00000512070 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
TRIO-218ENST00000512070 KMT2DO14686 5537 aa3.73□□□□□ -1.81
TRIO-218ENST00000512070 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
TRIO-218ENST00000512070 USH2AO75445 5202 aa3.71□□□□□ -1.82
TRIO-218ENST00000512070 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
TRIO-218ENST00000512070 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
TRIO-218ENST00000512070 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
TRIO-218ENST00000512070 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
TRIO-218ENST00000512070 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
TRIO-218ENST00000512070 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
TRIO-218ENST00000512070 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
TRIO-218ENST00000512070 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
TRIO-218ENST00000512070 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
TRIO-218ENST00000512070 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
TRIO-218ENST00000512070 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
TRIO-218ENST00000512070 NEBP20929 6669 aa3.07□□□□□ -1.92
TRIO-218ENST00000512070 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
TRIO-218ENST00000512070 MDN1Q9NU22 5596 aa3.03□□□□□ -1.93
TRIO-218ENST00000512070 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
TRIO-218ENST00000512070 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
TRIO-218ENST00000512070 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
TRIO-218ENST00000512070 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
TRIO-218ENST00000512070 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
TRIO-218ENST00000512070 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
TRIO-218ENST00000512070 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
TRIO-218ENST00000512070 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
TRIO-218ENST00000512070 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TRIO-218ENST00000512070 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
TRIO-218ENST00000512070 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
TRIO-218ENST00000512070 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TRIO-218ENST00000512070 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
TRIO-218ENST00000512070 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
TRIO-218ENST00000512070 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
TRIO-218ENST00000512070 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
TRIO-218ENST00000512070 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
TRIO-218ENST00000512070 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
TRIO-218ENST00000512070 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
TRIO-218ENST00000512070 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
TRIO-218ENST00000512070 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
TRIO-218ENST00000512070 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
TRIO-218ENST00000512070 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
TRIO-218ENST00000512070 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 77.1 ms