RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
NME1-209ENST00000511355 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
NME1-209ENST00000511355 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
NME1-209ENST00000511355 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
NME1-209ENST00000511355 SPRR2EP22531 72 aa5.21□□□□□ -1.58
NME1-209ENST00000511355 SPRR2BP35325 72 aa5.21□□□□□ -1.58
NME1-209ENST00000511355 SPRR2AP35326 72 aa5.21□□□□□ -1.58
NME1-209ENST00000511355 KMT2DO14686 5537 aa5.21□□□□□ -1.58
NME1-209ENST00000511355 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
NME1-209ENST00000511355 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
NME1-209ENST00000511355 MDN1Q9NU22 5596 aa5.15□□□□□ -1.58
NME1-209ENST00000511355 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
NME1-209ENST00000511355 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
NME1-209ENST00000511355 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
NME1-209ENST00000511355 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
NME1-209ENST00000511355 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
NME1-209ENST00000511355 SPRR2DP22532 72 aa5.05□□□□□ -1.6
NME1-209ENST00000511355 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
NME1-209ENST00000511355 MT1EP04732 61 aa4.95□□□□□ -1.62
NME1-209ENST00000511355 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
NME1-209ENST00000511355 MT1LQ93083 61 aa4.83□□□□□ -1.64
NME1-209ENST00000511355 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
NME1-209ENST00000511355 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
NME1-209ENST00000511355 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
NME1-209ENST00000511355 MT1GP13640 62 aa4.75□□□□□ -1.65
NME1-209ENST00000511355 MT1MQ8N339 61 aa4.68□□□□□ -1.66
NME1-209ENST00000511355 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NME1-209ENST00000511355 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
NME1-209ENST00000511355 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
NME1-209ENST00000511355 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
NME1-209ENST00000511355 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
NME1-209ENST00000511355 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
NME1-209ENST00000511355 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
NME1-209ENST00000511355 MT4P47944 62 aa4.39□□□□□ -1.71
NME1-209ENST00000511355 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
NME1-209ENST00000511355 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
NME1-209ENST00000511355 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
NME1-209ENST00000511355 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
NME1-209ENST00000511355 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
NME1-209ENST00000511355 MT1AP04731 61 aa4.22□□□□□ -1.73
NME1-209ENST00000511355 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.73
NME1-209ENST00000511355 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
NME1-209ENST00000511355 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
NME1-209ENST00000511355 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
NME1-209ENST00000511355 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
NME1-209ENST00000511355 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.76
NME1-209ENST00000511355 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
NME1-209ENST00000511355 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
NME1-209ENST00000511355 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
NME1-209ENST00000511355 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
NME1-209ENST00000511355 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
NME1-209ENST00000511355 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
NME1-209ENST00000511355 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
NME1-209ENST00000511355 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
NME1-209ENST00000511355 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
NME1-209ENST00000511355 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
NME1-209ENST00000511355 MT3P25713 68 aa3.74□□□□□ -1.81
NME1-209ENST00000511355 PRM1P04553 51 aa3.65□□□□□ -1.83
NME1-209ENST00000511355 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
NME1-209ENST00000511355 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
NME1-209ENST00000511355 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
NME1-209ENST00000511355 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
NME1-209ENST00000511355 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
NME1-209ENST00000511355 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
NME1-209ENST00000511355 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
NME1-209ENST00000511355 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
NME1-209ENST00000511355 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
NME1-209ENST00000511355 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
NME1-209ENST00000511355 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
NME1-209ENST00000511355 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
NME1-209ENST00000511355 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
NME1-209ENST00000511355 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
NME1-209ENST00000511355 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
NME1-209ENST00000511355 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
NME1-209ENST00000511355 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
NME1-209ENST00000511355 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
NME1-209ENST00000511355 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 16 ms